| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1437 |
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| Symbol | |
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| ID | 3966115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1855881 |
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| End bp | 1857035 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920514 |
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| Product | PQQ repeat-containing protein |
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| Protein accession | YP_526911 |
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| Protein GI | 90021084 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.234341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTTTA AATTATGGGC ATTAGCTACC GCCTGCGTAC TTGCGTTGGG TGGTTGCTCG
TCCAATAAAG AAAGCGAAAA CTTAAAGCCG TTAGAGTTAG TTAAATTTAA ATCTACGGTG
AAAGTGGAGC GCGTTTGGTC TGCCAAAGTG GGCAAAGGCC AAGATCGCCG CTACACAGTA
TTCGTACCTG CAGTATTAGA TGATGCTGTT TTTGCATCTG ATACCGAAGG GAATATATTC
GCTTTCAACG TGGAAACTGG CAAGCGCCTG TGGAAACACG AGTTAGACGA GCCGGTTTCT
GGTGCTGTGG GCGCCGGTGG CGGCTTAGTA CTGGTAGGTA CTTATGAAGG TGAAGTTGTT
GCGTTAGATG CAAAAACTGG CGATTTGAAA TGGCGCTCTA AAGCTAGCAG CGAAGTATTA
GCGCCACCGC AATCAGACGG TAGCATTGCT GTAGCAAGTA CTATTGATGC CCGCCTTTTT
GCTTATGATG CGATAACCGG TAAACCGCTT TGGTCGCACG ATCATATAGC CCCAGTACTT
ACGCTGCGCA CAACGGCTGC GCCAGTAATA AGTGGTACGC AGGTATTGAG TGCTTTTGAT
AATGGCCAGA TGCTAGCGTT TTCTGCCAGC GATGGTTCTG TAAGCTGGGA AGTGCGTGTA
GCTCAGCCGA AGGGACGCCA CGATTTAGAA AAAATGGTGG ATATAGACGG CACCCCTGTG
GTCGATTCCG CTTTTGTTTA CACCACCTCG TACCAAGGTG CTGTAATGGC GATTGCTCGC
GGTACCGGAC GAGTGTTGTG GAAACGCGAT GCCTCCAGTT ATGTGCGCCC AGCTGTTGCG
CATAATGCCG TATACGTGGC AACAGAAGAC GACCGTCTAG TAGCATACAA CGCGAGCAAT
GGCGGTACTG TGTGGGAAAA CGCAGAAATG CTTCGCCGCG ATTTAAGTGC ACCAGGTGTA
ATGGGTGATT ACATTACAGC GATAGACAAA AAAGGCTACA TGCATGTGGT TGATAGGGAA
AACGGCCAAT TTGTAGCGCG TATTAAGCCT TCTGGCGACG GTTTCCGTTC GGTACCTGTT
AGCTATAAAG ATGGTTTAAT CTTACTTTCT GATGATGGTG TGCTAAGTTT TTATAAAGCT
AAGCCTGCTA AATAG
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| Protein sequence | MKFKLWALAT ACVLALGGCS SNKESENLKP LELVKFKSTV KVERVWSAKV GKGQDRRYTV
FVPAVLDDAV FASDTEGNIF AFNVETGKRL WKHELDEPVS GAVGAGGGLV LVGTYEGEVV
ALDAKTGDLK WRSKASSEVL APPQSDGSIA VASTIDARLF AYDAITGKPL WSHDHIAPVL
TLRTTAAPVI SGTQVLSAFD NGQMLAFSAS DGSVSWEVRV AQPKGRHDLE KMVDIDGTPV
VDSAFVYTTS YQGAVMAIAR GTGRVLWKRD ASSYVRPAVA HNAVYVATED DRLVAYNASN
GGTVWENAEM LRRDLSAPGV MGDYITAIDK KGYMHVVDRE NGQFVARIKP SGDGFRSVPV
SYKDGLILLS DDGVLSFYKA KPAK
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