| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1435 |
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| Symbol | |
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| ID | 3966113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1853884 |
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| End bp | 1855155 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920512 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_526909 |
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| Protein GI | 90021082 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.122406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAAAGA TACAAGCATT GCGCGGTATG AACGACCTTC TACCGCAGGA TAGCCCCGTT
TGGCAGTATT TAGAATCTAC AGTAACCACA CTGTTTAAAC GGTATGGCTA CCAAGAAATT
CGCTTTCCAA TATTAGAGCA AACCGAGCTG TTTAAGCGCT CAATTGGCGA AGTAACCGAC
ATTGTTGAGA AGGAAATGTA CACCTTCAAA GATCGCAATG ACGAAAGCTT AACGCTGCGC
CCAGAAGGTA CCGCCAGTTG TGTGCGCGCC TGCGAGCAAA ACCAATTGCT GTTTAATCGC
GGTACGCTTA CGCAAAAGCT TTGGTATCAA GGGCCAATGT TTCGCTACGA GAAGCCTCAA
AAGGGCCGTT TGCGTCAATT CCACCAGTTT GGTGTAGAGG CTTTTGGCTT AAATGGCCCA
GATATAGACG CAGAGCTGCT TATTATGTCG GCGCGTTTAT GGAAAGAGTT GGGCATAAGC
TCGGCAGTAG AGTTGCAGTT AAATAGCTTG GGGTCGAGTG ACGCACGTGC CAAATTCAAA
GCCGATCTTG TCGCTTTTTT AGAGCAGCAT AAAGAAAGGC TAGACGAAGA TAGCCAGCGT
CGTTTAGGCT CTAACCCGCT GCGAATTTTG GATAGTAAAG AGGCTAAAAC ACAGGCTTTA
TTAGATGAAG CTCCAAGCCT GCTAGATTAC CTTGATGATG AATCGTTGGC GCACTTTGAG
CAGCTAAAGG CTTTGCTGGA TGCAGCCGGT GTGGCTTATA CCATTAACCC GCGGCTTGTG
CGCGGTTTAG ATTACTATGG CAAAACCGTA TTTGAGTGGG TTACTACCCA GCTTGGCTCA
CAGGGCACCG TTTGCGCTGG CGGCCGCTAC GACGGTTTGG TGAACCAACT TGGCGGTCAA
CCCACGCCTG CTGTGGGCTT TGGTATGGGA ATAGAGCGCC TCGTGTTACT GCTTCAGGAA
ATGAATGTAC TGCCTGAGGA AATATTTCAA ACACTTGATG TCTACATCAT GGCAGTTGGC
GATGTTGCCC CAGCAGCTTT CAGCTTAGCT GAACAAATTA GAGATCGCTT CCCTGCAATG
CGGGTGCAAA CCCACTGCGG GGGCGGCAGC TTTAAAAACC AGATGAAGAA AGCAGATCGC
AGTGGTGCGG ATGTGGCGCT TATTCTGGGT GAAAACGAAG TGGCAGCACA GGAGGTGACG
CTGAAGTATC TGCGTAAGGA CCAACCGCAA ACCACAATAA AACAAACAGA TTTACTAGAT
CTATTGGCTT AG
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| Protein sequence | MKKIQALRGM NDLLPQDSPV WQYLESTVTT LFKRYGYQEI RFPILEQTEL FKRSIGEVTD
IVEKEMYTFK DRNDESLTLR PEGTASCVRA CEQNQLLFNR GTLTQKLWYQ GPMFRYEKPQ
KGRLRQFHQF GVEAFGLNGP DIDAELLIMS ARLWKELGIS SAVELQLNSL GSSDARAKFK
ADLVAFLEQH KERLDEDSQR RLGSNPLRIL DSKEAKTQAL LDEAPSLLDY LDDESLAHFE
QLKALLDAAG VAYTINPRLV RGLDYYGKTV FEWVTTQLGS QGTVCAGGRY DGLVNQLGGQ
PTPAVGFGMG IERLVLLLQE MNVLPEEIFQ TLDVYIMAVG DVAPAAFSLA EQIRDRFPAM
RVQTHCGGGS FKNQMKKADR SGADVALILG ENEVAAQEVT LKYLRKDQPQ TTIKQTDLLD
LLA
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