Gene Sde_1431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1431 
Symbol 
ID3966109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1849583 
End bp1850779 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content49% 
IMG OID637920508 
ProductCrp/FNR family transcriptional regulator 
Protein accessionYP_526905 
Protein GI90021078 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGTAG AATCTACTGC TGCTCCAGCC AAAGTAAATT TAATGGGGCT AAGCCAAGCC 
AAGCTAGAGG CGTTTTTTGA CTCTTTGGGT GAAAAACGCT TCCGTGCAAC CCAAGTGCTG
AAGTGGATTC ACCAAATGGG TGTTACCGAT TTTGAGCAAA TGACCAATAT CAGCAAGCCT
TTGCGAGACA AGCTTTCGCA GGTGGCCGAG GCGGTTGCGC CAGAAGTGGT TAATCAGTGG
GACTCCAGTG ACGGCACGCG CAAGTTCTTA ATTCGCGTAG GTGGCGGCAA CGCGGTCGAG
ACCGTATACA TTCCAGATGG CGATCGCGGC ACGTTGTGCG TGTCGTCTCA AGTAGGGTGC
TCGTTAGATT GCAGCTTCTG CGCAACGGGT AAGCAGGGTT TCAACCGCGA CCTGACTGCA
GCAGAGATTA TCGGTCAGGT TTGGCAGGCG GCGAAGTCGT TCAATCAATT TGGGGTTGGG
GCGCAGCGCA AAATTACCAA TGTAGTAATG ATGGGTATGG GCGAGCCGCT ATTAAACTTC
GACAATGTTG TCGATTCTAT GAACCTTATG ATGCACGATA ACTGCTATGG CTTGTCTAAG
CGTCGTGTAA CGCTGAGTAC CTCGGGTGTG GTACCCGCTT TAGATAAGCT GGGCGAGTAT
ACCGATGCGT GTTTAGCCAT ATCGTTGCAT GCGCCGAATA ATGCCTTGCG CAATGAGCTG
GTACCTATTA ACAAAAAATA CCCAATCGAA ATGCTATTGG CATCGGCAAA GCGTTATATT
GATGGCTTGC CAGATGTGCG TCGTAAAATG ACCATCGAAT ACACGTTAAT CGATCAGGTA
AACGACCGGC CAGAGCACGC TCACGAGTTG GCAGAATTGC TTAAAGATAT ACCGGTTAAA
ATTAATTTAA TTCCGTTTAA CCCGTTTAAT TTATCCAATT ACAAGCGTGT AAGTAACAAT
GCATTGCGTC GCTTTCAGCA GATACTTATT GACGCGGGTT ACACCACCAC TGTTCGCACC
ACGCGCGGCG ACGATATAGA CGCGGCGTGC GGCCAATTGG CAGGGCAGGT AAACGACCGC
ACTAAGCGAA GTCAGCGCTA TAAAATTGAT AAAAATGCAT TGGATGCTTC TAATGCCGAT
ATTATTCCCG TGAAGCTTGT CGACGAGGCA GACGTTTCAA TTACGTTTAA CGGTTAG
 
Protein sequence
MTVESTAAPA KVNLMGLSQA KLEAFFDSLG EKRFRATQVL KWIHQMGVTD FEQMTNISKP 
LRDKLSQVAE AVAPEVVNQW DSSDGTRKFL IRVGGGNAVE TVYIPDGDRG TLCVSSQVGC
SLDCSFCATG KQGFNRDLTA AEIIGQVWQA AKSFNQFGVG AQRKITNVVM MGMGEPLLNF
DNVVDSMNLM MHDNCYGLSK RRVTLSTSGV VPALDKLGEY TDACLAISLH APNNALRNEL
VPINKKYPIE MLLASAKRYI DGLPDVRRKM TIEYTLIDQV NDRPEHAHEL AELLKDIPVK
INLIPFNPFN LSNYKRVSNN ALRRFQQILI DAGYTTTVRT TRGDDIDAAC GQLAGQVNDR
TKRSQRYKID KNALDASNAD IIPVKLVDEA DVSITFNG