Gene Sde_1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1430 
Symbol 
ID3966108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1849121 
End bp1849546 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content48% 
IMG OID637920507 
Productnucleoside diphosphate kinase 
Protein accessionYP_526904 
Protein GI90021077 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0105] Nucleoside diphosphate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTG AGCGCACGCT ATCGATTGTA AAACCTGATG CTGTAGAAAA AAATATTATC 
GGCAAAGTGA TCAGCCGCTT TGAAAAAGCA GGTTTAAAAA TTGTAGCCGC TAAAATGATG
CACCTAACAG AAGAAAAGGC TCGTGGGTTT TACGCCGAGC ATGAAGGTCG CCCGTTCTTT
GCCGGTTTAG TTGAATTTAT GACATCTGGC CCAGTAGTGG TACAGGTGCT TGAAGGCGAA
AATGCAATTG CCTTAAACCG TGAACTTATG GGCGCCACTA ACCCTGCCGA AGCTGCCGAA
GGCACTTTGC GCAAGGATTT CGCCGATTCA GTGGGTCGCA ACGCCGTTTA CGGCTCAGAT
TCGCCTGCTT CTGCCGAGCG CGAAATTAAC TACTTTTTCG ACGCTAGTGA AATCTGTCCA
CGCTAA
 
Protein sequence
MAIERTLSIV KPDAVEKNII GKVISRFEKA GLKIVAAKMM HLTEEKARGF YAEHEGRPFF 
AGLVEFMTSG PVVVQVLEGE NAIALNRELM GATNPAEAAE GTLRKDFADS VGRNAVYGSD
SPASAEREIN YFFDASEICP R