Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1430 |
Symbol | |
ID | 3966108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1849121 |
End bp | 1849546 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637920507 |
Product | nucleoside diphosphate kinase |
Protein accession | YP_526904 |
Protein GI | 90021077 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0105] Nucleoside diphosphate kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTATTG AGCGCACGCT ATCGATTGTA AAACCTGATG CTGTAGAAAA AAATATTATC GGCAAAGTGA TCAGCCGCTT TGAAAAAGCA GGTTTAAAAA TTGTAGCCGC TAAAATGATG CACCTAACAG AAGAAAAGGC TCGTGGGTTT TACGCCGAGC ATGAAGGTCG CCCGTTCTTT GCCGGTTTAG TTGAATTTAT GACATCTGGC CCAGTAGTGG TACAGGTGCT TGAAGGCGAA AATGCAATTG CCTTAAACCG TGAACTTATG GGCGCCACTA ACCCTGCCGA AGCTGCCGAA GGCACTTTGC GCAAGGATTT CGCCGATTCA GTGGGTCGCA ACGCCGTTTA CGGCTCAGAT TCGCCTGCTT CTGCCGAGCG CGAAATTAAC TACTTTTTCG ACGCTAGTGA AATCTGTCCA CGCTAA
|
Protein sequence | MAIERTLSIV KPDAVEKNII GKVISRFEKA GLKIVAAKMM HLTEEKARGF YAEHEGRPFF AGLVEFMTSG PVVVQVLEGE NAIALNRELM GATNPAEAAE GTLRKDFADS VGRNAVYGSD SPASAEREIN YFFDASEICP R
|
| |