| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1427 |
|---|
| Symbol | |
|---|
| ID | 3966105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 1845726 |
|---|
| End bp | 1846298 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637920504 |
|---|
| Product | GMP synthase-like |
|---|
| Protein accession | YP_526901 |
|---|
| Protein GI | 90021074 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0386] Glutathione peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGA AAACAAACAC AATAAAGCAG CTTCTCGCTC CTAGCTTTTT GCTCGCATGT
ACCTTCACAG CAAGTACTCA TGCAGCAGAA GAGTCGGCGC AATGCCCTAG CTACCTAGAT
CACAGCTTTA AAAAGCTACA CAGCACGCAA ACCGTTAACT TGTGCGAGTT ATACACTGGC
AAGCCACTGT TAATAGTAAA TACCGCCAGC CATTGCGGTT ACACCAAACA ATTTGGTGGC
CTAGAAAAAC TTTACCAATC CTACAAAGAC CAAGGCCTGC AAGTTATCGG CTTTGCATCG
GATGATTTTA AGCAAGCGGC TAAATCTGAA ATGGAAGCAG CCACTATTTG CTATAAAAAC
TACGGTGTTA CTTTTACCAT GCTGGCCCCA ACTACCGTAA CCGGTGAAAA AGCGAATGCC
GTGTTCAGCC ACCTGAACGC TAACACCTCC GCACCATCAT GGAACTTCAA CAAATATCTA
ATCACTAAAA ACGGGCAAAA CATCGAAAAG TTTAATAGTG ATGTGACCCC TCTTGCATCA
GACCTAGAGA AAAAAGTGCA AAAAGCGCTC TAA
|
|---|
| Protein sequence | MKRKTNTIKQ LLAPSFLLAC TFTASTHAAE ESAQCPSYLD HSFKKLHSTQ TVNLCELYTG
KPLLIVNTAS HCGYTKQFGG LEKLYQSYKD QGLQVIGFAS DDFKQAAKSE MEAATICYKN
YGVTFTMLAP TTVTGEKANA VFSHLNANTS APSWNFNKYL ITKNGQNIEK FNSDVTPLAS
DLEKKVQKAL
|
|---|
| |