Gene Sde_1419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1419 
Symbol 
ID3966097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1837748 
End bp1838284 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content48% 
IMG OID637920496 
Productmetal-sulfur cluster enzyme 
Protein accessionYP_526893 
Protein GI90021066 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID[TIGR03406] probable FeS assembly SUF system protein SufT 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.201751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAAC AGCGCATGGC GACAACTCGT CGGGATTGCC CCGCGAGACT TGTACCGGTT 
GGCGACCCAA TAACAATTCC AGCGAATAAT TTTGTTACTA TTACCCAATC GCTTGGTGGT
AATTACACCG TGGTGTACCA AGGTAATATG CTGCGTGTAG ATGGCACAGA TGCAGATGCG
TTGGGTTTGC CTAAATATGA ATTAAATTTT GCAGATGCCG GCGATGGAAA AATTAATGAA
GAGCAAGTGT GGGAAGCGTT GGAATCTGTT TACGACCCCG AGATTCCTGT AAACCTACGC
GCGCTGGGTT TGATTTACCA AATGAAAGCC GACCAGCAAA GAGGCACGGT GCACATTGAA
ATGACCTTAA CAGCACCAGG CTGCGGTATG GGGCCAGTGT TAGTGGGCGA TGTAAAACAT
CGCGTGGCGC TTGTGCCAAA TGTTAAAAAA GTTGAGGTGG AACTTGTGTT CGACCCACCA
TGGCACCGCG ATATGATGTC GGAAGAAGCC CAGCTAGAAA CGGGTATGTT TTACTAA
 
Protein sequence
MAEQRMATTR RDCPARLVPV GDPITIPANN FVTITQSLGG NYTVVYQGNM LRVDGTDADA 
LGLPKYELNF ADAGDGKINE EQVWEALESV YDPEIPVNLR ALGLIYQMKA DQQRGTVHIE
MTLTAPGCGM GPVLVGDVKH RVALVPNVKK VEVELVFDPP WHRDMMSEEA QLETGMFY