Gene Sde_1418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1418 
Symbol 
ID3968708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1837378 
End bp1837728 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content45% 
IMG OID637920495 
ProductATPase 
Protein accessionYP_526892 
Protein GI90021065 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTG AAACGTTTAG TGTATCGGAC GCTATTCAAG TTACGCCCGC TGCTGCCGAG 
CATTTTGCTA AGCAGCTAAA GCAGAGCGGT AAGGCCGCTG TGCGTTTAAG TTTAAAAGAA
AGTGGCTGTA CTGGGTTTAT GTACGTAATT GACGAAATTG ACTCGCCAGT AGACGGCGAT
ATAACCATTA CATTGCCCAA TGACGTAACC GTATTTGTTG ACCCAGCCAA ATTGGATGCG
ATTAAAGGTA CGGTGGTGGA TTACCGCCTA GAAGGCATTA ATCGCAACTT AATAATGGAC
AACCCAAACG TCAAAGCAGC TTGTGGCTGT GGCGAAAGTT TTAACGTATA A
 
Protein sequence
MSVETFSVSD AIQVTPAAAE HFAKQLKQSG KAAVRLSLKE SGCTGFMYVI DEIDSPVDGD 
ITITLPNDVT VFVDPAKLDA IKGTVVDYRL EGINRNLIMD NPNVKAACGC GESFNV