| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1416 |
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| Symbol | |
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| ID | 3968706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1834752 |
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| End bp | 1836071 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920493 |
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| Product | Iron-regulated ABC transporter permease protein SufD |
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| Protein accession | YP_526890 |
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| Protein GI | 90021063 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.199083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGATT TTATAGCAAA CGCTGCGGCC ATAGCTGCTT CACCGCTTAC ATGGTTGCAA
GATAAAACAC AGCAAGGTAA ACAAGCTTGG CTTGGTCACC GTTTTCCTAC CCGTAAAACG
GAAAACTGGA AGTACACCAA TTTGCGTGCG CTAGAGCAGG GCGATTACTT GCGCGCAGCC
AATATTGGGG CGGCGCCAGA AGCGTTGCCG CAGCATTTAA CCATTGCCGG TTTAGAGGCT
GTTAAACTTG TTTTCGTGAA TGGCCAATTT GTTGCCAGTT TATCCGACGA TTTAGCGCGC
GCCAATGTTG CGGGTTTAGA GTTAACGCTA TTTTCCAATG CTAGCGATGC GCAGAAAAAA
GCCATTAACG AACAGCTTGG GCAGCTAGTT AATAGTACTA AATATGAATT TTCTGGTTTG
AACACGGCGC AACTTAACGA CGGCGTGTAT ATCAATGTGG CTAAAAACCA ACAAGTGGCT
AAGCCTATCC ACATTGTTTG GATGACCACT GCGCAAGACT CTGCCTTTAC TGTGCCGCAC
CGCTTATTGG TAAACCTAGA AACAGGTGCA AGCGCCTGCG TTATCGAGCA GTTTGTAAGT
GGCGACGAAG CCCAAAATAG CTTTACCCAT AGTGTTTCTG AATTTAACGT AGGCGAAAAT
GCGCGCTTAC AGCACTACCG TTTGCAGCAA GAGCAAGAAG ATGCCATTCA TATTGGTGGC
GTGTTTGTGC GCTTAGATCG CTCTGCAGAC TTAGACAGTT TTCATATGGC GTTTGGCAGC
AAAATTAAAC GCGTAGATAT TGAAGTGCAG CATCAAGGTG AAGGCTCTAC CTCTAAAATT
AATGGGGTGT ATTTGCCAAA AAACAATCAG CATATTGATT ATCACACCTG CATAGAACAC
GCCGTGCCTC ACTGTACTTC ACAAGAAACT TTTCGCGGAA TTATTGCCGA TAGCGCGCAC
GCGGTATTTA ACGGGCGCAT TCATATTCAT CCAGATGCGC AAAAAACGCT GGCTGAATTA
AGCAATAAAA ACTTGTTAAC CAGTGATAAA GCACAAATAG ATACCAAGCC CGAGCTTGAG
ATTTATGCCG ACGATGTGCG CTGTGCACAC GGTGCCACCA TTGCGCAGCT GGATGAGAAA
TCTCTTAATT ATTTGCGCAC GCGTGGCATT TCGCTCGACG AAGCACAAGT AATGCTTAGC
TATGGTTTTA TTAACGAATT AATTAACGAT GTTGCGTTAG AGCCAATTGG TACTTATTTG
CGTCCCATTT TGGCCAATCG TTTCGCCAAA GAACCGTCGT TAGTGAGGCA CATTGCATGA
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| Protein sequence | MSDFIANAAA IAASPLTWLQ DKTQQGKQAW LGHRFPTRKT ENWKYTNLRA LEQGDYLRAA
NIGAAPEALP QHLTIAGLEA VKLVFVNGQF VASLSDDLAR ANVAGLELTL FSNASDAQKK
AINEQLGQLV NSTKYEFSGL NTAQLNDGVY INVAKNQQVA KPIHIVWMTT AQDSAFTVPH
RLLVNLETGA SACVIEQFVS GDEAQNSFTH SVSEFNVGEN ARLQHYRLQQ EQEDAIHIGG
VFVRLDRSAD LDSFHMAFGS KIKRVDIEVQ HQGEGSTSKI NGVYLPKNNQ HIDYHTCIEH
AVPHCTSQET FRGIIADSAH AVFNGRIHIH PDAQKTLAEL SNKNLLTSDK AQIDTKPELE
IYADDVRCAH GATIAQLDEK SLNYLRTRGI SLDEAQVMLS YGFINELIND VALEPIGTYL
RPILANRFAK EPSLVRHIA
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