Gene Sde_1414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1414 
Symbol 
ID3968704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1832470 
End bp1833909 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content46% 
IMG OID637920491 
Productcysteine desulfurase activator complex subunit SufB 
Protein accessionYP_526888 
Protein GI90021061 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.80589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAGG AACAACTCGA CCATTTAATC AGAAAAGATT ATGCCGCAGG GTTTATCACC 
GATGTTGAAT CGGATACCTT GCCACCAGGG TTAAATGAAG AAGTCATTGC ATTTATCTCC
AACAAAAAGA ACGAGCCAGA GTGGCTGTTG GAGTGGCGAT TAAAAGCCTA CCGTGCTTGG
CGTGAAATGG ACGAGCCAGA TTGGGCGCAC GTAAGCTACC CGAAAATTGA TTTCGACGAA
ATCTCTTACT ATTCCGCGCC TAAAAGCATG GCCGACAAGC CAAAAAGCTT AGACGAAGTA
GACCCAGAGC TTTTGCGCAC TTACGAGAAA TTAGGCATTC CACTGCACGA GCAAGAAATG
CTTGCGGGTG TAGCGGTAGA CGCCGTATTC GACTCTGTAT CTGTGGGCAC AACCTTCCGC
AAAAAACTGT TTGAGGCCGG TGTTATTTTT TGCCCAATTT CTGAGGCTGT ACACGAATAC
CCAGAGCTGG TTAAAAAGTA CCTTGGCAGT GTTGTACCGC AAAAAGATAA CTACTACGCA
GCATTAAACT GTGCAGTGTT TAGTGATGGT TCGTTTGTGT ACATTCCAAA AGGCGTACGC
TGCCCAATGG AGCTGTCTAC TTACTTCCGT ATTAACGAAT CTAAAACCGG TCAGTTCGAG
CGCACACTTA TTATTGCCGA TGAAGGCAGC CACGTAAGCT ATTTGGAAGG CTGTACTGCG
CCAATGCGCG ACGAAAACCA ATTGCACGCA GCGGTTGTTG AGTTGGTTGC GTTAGATAAC
GCCAAAATCA AATATTCCAC GGTACAAAAC TGGTACCCAG GTGATGCCGA AGGCAAAGGC
GGCATATACA ACTTTGTAAC CAAGCGCGGC ATTGCTCACA CCAACGCTCA TATTTCTTGG
ACACAAGTAG AAACCGGTTC TGCCGTAACG TGGAAGTACC CAAGCTGTGT ATTAAAAGGC
GATAACAGCG TAGGTGAGTT TTACTCTGTA GCACTTACCA ACAATCATCA GCAGGCCGAT
ACCGGCACAA AGATGATCCA CTTGGGTAAA AATACGCGCT CAACCATTAT CTCTAAGGGT
ATTTCTGCAG GTAAAAGCTC TAATGCTTAT CGCGGTTTGG TGCGCATGAA CCCAGGCGCT
ACCGGTGCCA GAAACTACAC CCAGTGCGAC TCATTGCTTA TTGGCGATAA ATGCGCAGCG
CACACCTTTC CTTATATCGA AAGTAAAAAC CCAAGCGCTG TGGTAGAGCA TGAAGCCACC
ACCTCTAAGG TGAGTGAAGA TCAACTTTAT CTTTGCCAGC AGCGCGGCAT CGATGCAGAA
AAAGCTGTGT CTATGATTGT TAACGGTTTC TGTAAAGAAG TTTTTAAAGA GTTACCCATG
GAGTTTGCGG TAGAAGCCGG CAAGCTATTA GAAGTGAGTT TAGAAGGTTC GGTAGGTTAA
 
Protein sequence
MSQEQLDHLI RKDYAAGFIT DVESDTLPPG LNEEVIAFIS NKKNEPEWLL EWRLKAYRAW 
REMDEPDWAH VSYPKIDFDE ISYYSAPKSM ADKPKSLDEV DPELLRTYEK LGIPLHEQEM
LAGVAVDAVF DSVSVGTTFR KKLFEAGVIF CPISEAVHEY PELVKKYLGS VVPQKDNYYA
ALNCAVFSDG SFVYIPKGVR CPMELSTYFR INESKTGQFE RTLIIADEGS HVSYLEGCTA
PMRDENQLHA AVVELVALDN AKIKYSTVQN WYPGDAEGKG GIYNFVTKRG IAHTNAHISW
TQVETGSAVT WKYPSCVLKG DNSVGEFYSV ALTNNHQQAD TGTKMIHLGK NTRSTIISKG
ISAGKSSNAY RGLVRMNPGA TGARNYTQCD SLLIGDKCAA HTFPYIESKN PSAVVEHEAT
TSKVSEDQLY LCQQRGIDAE KAVSMIVNGF CKEVFKELPM EFAVEAGKLL EVSLEGSVG