Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1414 |
Symbol | |
ID | 3968704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1832470 |
End bp | 1833909 |
Gene Length | 1440 bp |
Protein Length | 479 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637920491 |
Product | cysteine desulfurase activator complex subunit SufB |
Protein accession | YP_526888 |
Protein GI | 90021061 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
TIGRFAM ID | [TIGR01980] FeS assembly protein SufB |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.80589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAGG AACAACTCGA CCATTTAATC AGAAAAGATT ATGCCGCAGG GTTTATCACC GATGTTGAAT CGGATACCTT GCCACCAGGG TTAAATGAAG AAGTCATTGC ATTTATCTCC AACAAAAAGA ACGAGCCAGA GTGGCTGTTG GAGTGGCGAT TAAAAGCCTA CCGTGCTTGG CGTGAAATGG ACGAGCCAGA TTGGGCGCAC GTAAGCTACC CGAAAATTGA TTTCGACGAA ATCTCTTACT ATTCCGCGCC TAAAAGCATG GCCGACAAGC CAAAAAGCTT AGACGAAGTA GACCCAGAGC TTTTGCGCAC TTACGAGAAA TTAGGCATTC CACTGCACGA GCAAGAAATG CTTGCGGGTG TAGCGGTAGA CGCCGTATTC GACTCTGTAT CTGTGGGCAC AACCTTCCGC AAAAAACTGT TTGAGGCCGG TGTTATTTTT TGCCCAATTT CTGAGGCTGT ACACGAATAC CCAGAGCTGG TTAAAAAGTA CCTTGGCAGT GTTGTACCGC AAAAAGATAA CTACTACGCA GCATTAAACT GTGCAGTGTT TAGTGATGGT TCGTTTGTGT ACATTCCAAA AGGCGTACGC TGCCCAATGG AGCTGTCTAC TTACTTCCGT ATTAACGAAT CTAAAACCGG TCAGTTCGAG CGCACACTTA TTATTGCCGA TGAAGGCAGC CACGTAAGCT ATTTGGAAGG CTGTACTGCG CCAATGCGCG ACGAAAACCA ATTGCACGCA GCGGTTGTTG AGTTGGTTGC GTTAGATAAC GCCAAAATCA AATATTCCAC GGTACAAAAC TGGTACCCAG GTGATGCCGA AGGCAAAGGC GGCATATACA ACTTTGTAAC CAAGCGCGGC ATTGCTCACA CCAACGCTCA TATTTCTTGG ACACAAGTAG AAACCGGTTC TGCCGTAACG TGGAAGTACC CAAGCTGTGT ATTAAAAGGC GATAACAGCG TAGGTGAGTT TTACTCTGTA GCACTTACCA ACAATCATCA GCAGGCCGAT ACCGGCACAA AGATGATCCA CTTGGGTAAA AATACGCGCT CAACCATTAT CTCTAAGGGT ATTTCTGCAG GTAAAAGCTC TAATGCTTAT CGCGGTTTGG TGCGCATGAA CCCAGGCGCT ACCGGTGCCA GAAACTACAC CCAGTGCGAC TCATTGCTTA TTGGCGATAA ATGCGCAGCG CACACCTTTC CTTATATCGA AAGTAAAAAC CCAAGCGCTG TGGTAGAGCA TGAAGCCACC ACCTCTAAGG TGAGTGAAGA TCAACTTTAT CTTTGCCAGC AGCGCGGCAT CGATGCAGAA AAAGCTGTGT CTATGATTGT TAACGGTTTC TGTAAAGAAG TTTTTAAAGA GTTACCCATG GAGTTTGCGG TAGAAGCCGG CAAGCTATTA GAAGTGAGTT TAGAAGGTTC GGTAGGTTAA
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Protein sequence | MSQEQLDHLI RKDYAAGFIT DVESDTLPPG LNEEVIAFIS NKKNEPEWLL EWRLKAYRAW REMDEPDWAH VSYPKIDFDE ISYYSAPKSM ADKPKSLDEV DPELLRTYEK LGIPLHEQEM LAGVAVDAVF DSVSVGTTFR KKLFEAGVIF CPISEAVHEY PELVKKYLGS VVPQKDNYYA ALNCAVFSDG SFVYIPKGVR CPMELSTYFR INESKTGQFE RTLIIADEGS HVSYLEGCTA PMRDENQLHA AVVELVALDN AKIKYSTVQN WYPGDAEGKG GIYNFVTKRG IAHTNAHISW TQVETGSAVT WKYPSCVLKG DNSVGEFYSV ALTNNHQQAD TGTKMIHLGK NTRSTIISKG ISAGKSSNAY RGLVRMNPGA TGARNYTQCD SLLIGDKCAA HTFPYIESKN PSAVVEHEAT TSKVSEDQLY LCQQRGIDAE KAVSMIVNGF CKEVFKELPM EFAVEAGKLL EVSLEGSVG
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