| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1411 |
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| Symbol | |
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| ID | 3968701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1829753 |
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| End bp | 1830556 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637920488 |
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| Product | RNA methyltransferase |
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| Protein accession | YP_526885 |
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| Protein GI | 90021058 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.993978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGC ACGACAATTT CAATCGCATT CGAATCGTAA TGGTAAACAC TACACACCCC
GGTAATATTG GCGGCGCCGC GCGAGCTATG AAAAACATGG GGCTGGGTAA ACTGTATTTG
GTAGACCCTA AGCAATACCC CGCGGAAAAG GCAGTATGGC GCGCTGCGAG TGCAACGGAT
GTGCTAGATG ATGCAGTGGT GGTGGGTAGC CTAGATGAAG CGATAGCTGA TTGCACCTTG
GTTGTTGGCA CCAGCGCGCG TGAGCGCAGA ATTCCTTGGC CATTGCTTAC CCCGCGGGAG
TGTGGCGATA AAGCTTGGGC AGAGGCCGGT AAGGGCGAAG TGGCAATTGT GTTTGGTCGC
GAAGACCGCG GGTTAACAAA CGAAGAGCTG CAAAAGTGCC ATTATCACGT GCATATTCCG
TCAAACCCAG ATTACAGCTC GCTAAACATT GCGGCTGCTA TTCAGGTGTT GTGCTACGAG
ATTCGCATGA CGCATTTGGC CGAAAAAGAG GGTAAGCCCA TTCATTTTGA CGATTGGGAT
GTGCCGCCTG CCAAGCAGCA AGATATGGAG TACTACTACG CGCACTTGGA GGAAACGTTG
GCAAAGCTGG ATTTCTTAGA TCTATCCAAC CCACGCCAAA CCGTTACCCG CATTCGACGT
ATGTTTAACC GTATACGTAT GGATGAAATG GAAATTAGCA TTCTGCGCGG TATGCTCACA
TCTATTCAGA ACCAGATTTA CCATTCAGGT AACAAAATAG AGGCCCTAAA TGAAGAGATT
GCCAAATTAA AGGGTGAGAA GTAA
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| Protein sequence | MAEHDNFNRI RIVMVNTTHP GNIGGAARAM KNMGLGKLYL VDPKQYPAEK AVWRAASATD
VLDDAVVVGS LDEAIADCTL VVGTSARERR IPWPLLTPRE CGDKAWAEAG KGEVAIVFGR
EDRGLTNEEL QKCHYHVHIP SNPDYSSLNI AAAIQVLCYE IRMTHLAEKE GKPIHFDDWD
VPPAKQQDME YYYAHLEETL AKLDFLDLSN PRQTVTRIRR MFNRIRMDEM EISILRGMLT
SIQNQIYHSG NKIEALNEEI AKLKGEK
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