| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1406 |
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| Symbol | tgt |
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| ID | 3968696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1821968 |
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| End bp | 1823092 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920483 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_526880 |
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| Protein GI | 90021053 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.937214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.212389 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTTG AATTAACCAC AACCGATGGC GATGCACGTC GCGGTCAGCT CACTTTTTCT
CGCGGAACTG TTCAAACACC TGCTTTTATG CCGGTGGGCA CTTACGGTAC GGTTAAAGGC
ATGTTGCCCC GAGATATTGT TGATAGTGGA GCTGAAATAA TTTTAGGTAA TACTTTTCAC
CTTATGCTGC GGCCGGGCAC AGAGGTTGTA AAGGCGCACG GTGATTTGCA CGATTTTATT
CAGTGGCAGG GGCCAATTCT TACGGACTCT GGCGGCTTTC AGGTGTTTAG CCTCGGGGAT
ATGCGCAAAA TTAGCGAAGA GGGCGTGAAG TTTCGCTCGC CAATTGACGG CAGTGAAGTA
TTCCTAGACC CAGAAAAGGC TATGCAAGTG CAGCGCGATT TGGGCTCAGA TATTGTAATG
ATATTCGATG AGTGCACGCC GTACCCAGCA ACCGTGCACG AGGCGCGAGT GTCTATGGAG
CTCTCTTTAC GCTGGGCTAA GCGCAGTAAA GATGCCCACG GCGATAACCC ATCGGCTTTA
TTTGGTATTG TGCAGGGCGG TATGCATGAG AGCTTGCGTT CCGAATCCCT CAAAGGGTTA
ACCGAAATTG GCTTTGATGG CTATGCCATT GGTGGGCTTT CAGTGGGCGA GCCCAAAGAA
GATATGTTGC GCATTTTGAA TCACTTAAAA ACCGAGATGC CAGCCGATAA GCCGCGCTAC
CTAATGGGTG TGGGTAAGCC AGAAGATTTA GTTGAAGGTG TTTGCCGCGG TATAGATATG
TTCGATTGTG TGATGCCTAC ACGCAATGCG CGCAATGGTC ACTTGTTTAC TCAGGCTGGT
GTGGTAAAAA TACGCAACGC GAAGCACAGG CACGATACCG GCCCGCTGGA CCCAACCTGC
GATTGCTACA CCTGCCAAAA CTTTAGCCGC GCGTACTTAC ATCATTTAGA TAAATGTGGC
GAAATTTTAG GTGCCCAGCT GAATACAATC CACAATTTAC GCCATTATCA AACCGTAATG
AGTGAGTTGC GTGCAGCTAT AGGGAAGGGC GAGTTGGCGC AATATGTAAG CCATTTTTAT
GCTCGTCAAG GTAAAGAGCG GCCTGCAATT GCGACGCAAA GCTAA
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| Protein sequence | MKFELTTTDG DARRGQLTFS RGTVQTPAFM PVGTYGTVKG MLPRDIVDSG AEIILGNTFH
LMLRPGTEVV KAHGDLHDFI QWQGPILTDS GGFQVFSLGD MRKISEEGVK FRSPIDGSEV
FLDPEKAMQV QRDLGSDIVM IFDECTPYPA TVHEARVSME LSLRWAKRSK DAHGDNPSAL
FGIVQGGMHE SLRSESLKGL TEIGFDGYAI GGLSVGEPKE DMLRILNHLK TEMPADKPRY
LMGVGKPEDL VEGVCRGIDM FDCVMPTRNA RNGHLFTQAG VVKIRNAKHR HDTGPLDPTC
DCYTCQNFSR AYLHHLDKCG EILGAQLNTI HNLRHYQTVM SELRAAIGKG ELAQYVSHFY
ARQGKERPAI ATQS
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