Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1373 |
Symbol | |
ID | 3965853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1776964 |
End bp | 1778046 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637920449 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_526847 |
Protein GI | 90021020 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGC TCGCCGTTAG CCTTATTTTG CTACTGATAA TTATAAGTGC ACGTTTTGTA ACCTATTTGG CCGAAGCCGC TGCTGGGGAA TTAGACGGCG GTGTGTTGCT CACGCTAATG ACTTATCGGT TGCCTGCCTA TTTAGAGCTT ATTTTACCCT TGGGTTTGTT CTTGGGCATT CTTATGGCCT ATGGCCGCCT TTACTTAGAA AGTGAAATGA CCGTATTGCA CGCGTGTGGT TTAAGTCAGG GTAAGTTGAT TGGCTTTACT ATGGTCTCCA CTTTCGTCGT CGCGTGTGTG GTGGGGGTGT TTAGCCTGTA TTTGGGGCCA GAGGGTGTAA GAGCATCTGA AAAACTGTTG GCCGAGCAGC GCAACCGCAC CGATTTCGAA ACTTTAAAAC CCGCTCGTTT CCACGAATTA GATGGTGGCA GCGGTATTAG CTATGCAGAA TCTATTTCTG ACGATAAGCA AAAGCTGCAA AAAGTGTTTA TGGCTAAGCT AGCGCCCGAC AGCGTAGATG ACGACCTAAC CGTGCTAACC GCAGAGTCTG GTGAAACGGT GGTGGATGCT GAAACCGGTG TGAAATATCT GCTGCTAAAA AATGGGCGAC GTTATGTTGG CCGCCCGGGT GAAGTGAATT ACAAGGTTGT GGAATTCAAA ACGTTCTCTC AGATTCTCCC CGAGCCAGAT TACGAAGCCG TAAAGCCGAA AAAAGAAACA GACGGTTTGT CCACTGCTCA ATTATTCGAG CGAGATACAC TTGCAGCGCG CGCGGCATTG CAGTGGCGCT TATCTTTACC TGTATTGGTG ATGGTGGTGG GGTTATTAGC TGTGCCGCTA AGTCGTACCC AGCCAAGACA AGGGCGCTAC GCGAAAATGC TCCCGGCTAT TTTGTTGTAT ATCTTTTATT TGGTTTGCGT GAACGGAGCT CGTGGTGCTA TTGAAGATGG CAGCGCACCG TTTATAGGGT TGCTGTGGGT TGTGCATGGT GCGTTCTTTT GTTTGGCGCT GTTGTTAATT GGTGGAAAAT CGATGTTTGC CGGCCTATTT CGGTCTGTAT TTAGTAAAGG AGAGGCTGCG TGA
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Protein sequence | MSMLAVSLIL LLIIISARFV TYLAEAAAGE LDGGVLLTLM TYRLPAYLEL ILPLGLFLGI LMAYGRLYLE SEMTVLHACG LSQGKLIGFT MVSTFVVACV VGVFSLYLGP EGVRASEKLL AEQRNRTDFE TLKPARFHEL DGGSGISYAE SISDDKQKLQ KVFMAKLAPD SVDDDLTVLT AESGETVVDA ETGVKYLLLK NGRRYVGRPG EVNYKVVEFK TFSQILPEPD YEAVKPKKET DGLSTAQLFE RDTLAARAAL QWRLSLPVLV MVVGLLAVPL SRTQPRQGRY AKMLPAILLY IFYLVCVNGA RGAIEDGSAP FIGLLWVVHG AFFCLALLLI GGKSMFAGLF RSVFSKGEAA
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