| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1367 |
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| Symbol | |
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| ID | 3965847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1768212 |
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| End bp | 1769309 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920443 |
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| Product | transcription factor jumonji, jmjC |
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| Protein accession | YP_526841 |
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| Protein GI | 90021014 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAAGC GTTTATATTC GTTTGCAGTA CTGTTGGGAG CCTTAAGCTA TGGCAGCATT
GCCACGGCTG ATTCAGAATT ACATGTGTAC AACTGGTCCG ACTATATAGG CGAAGCCACT
GTTGCCGATT TCGAAAAAGA AACCGGCATA AAAGTGGTTT ACGACGTGTA CGACAGCAAT
GAAATTTTGG AAGCCAAGCT ACTTGCCGGC CGCAGTGGCT ACGATGTGGT TTTCCCAACT
GCACGCCCGT TTGCCGATCG TCAATTAAAG GCGGGGATAT TGCAGCCATT GCAAAAAGAT
TTACTATCTA ACTACGGCAA TATCGACCCC GTTATTTTGG CATCCCTTGC CGATTTAGAC
CCACAAAACA ACCACATGGT GCCTTACATG TGGGGCACTA CAGGCATTGG CTACAACGTA
GATAAGATTA AAAGCCTATT AGGTAAAGAC GTACCAGTAA ATACTTGGGC ACTAATCTTC
AACCCAGAAA TAGCTGGCAA GTTGGCGTCG TGCGGTATTT CGCTTATGGA TGACGCAACC
GAAGTGTTCG CAGCAGCCAA AATTTACCTA GGCATAGATG CGAGCGACTT CAGCAAAGCC
ACACAAGAAG CCGTTGCCGC GCTAGTTGCC AAAACGCGCA AAAATATACG CTACTTCCAC
AGCTCGCAAT ACATTAACGA CTTAGCCAAT GGCGATCTTT GTGTAGCCCA CGGTTACTCT
GGTGACGTAC TGCAAGCACG CGCCCGCGCG GAAGAAGCAG AGAAAGGCGT TAACGTTGCC
TATACCGTAC CTCAAGAAGG TGCTGTTGTT TGGTCGGATG TAATGGTTAT ACCTAAAGAT
GCGCCCAACC CTAAAGCCGC TCACGCATTT ATTAACTATT TAATGCAGCC AGAAGTGATT
GCCTCGGCTT CTAACGCAGT GGCATATGCA AACGCGAACG CTAAAGCCAC ACCATTTGTG
GACGAAGCCA TACGCAACGA CCCTGGCGTA TACCCAGCAG AAGCTACGCG CCAACGCTTA
GTGGTGTTAA TTGCTCCTAG CAACAACGAA ACCCGAGCAA TTACACGCTT GTGGACCCGC
ATAAAAACCG GTAAGTAA
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| Protein sequence | MVKRLYSFAV LLGALSYGSI ATADSELHVY NWSDYIGEAT VADFEKETGI KVVYDVYDSN
EILEAKLLAG RSGYDVVFPT ARPFADRQLK AGILQPLQKD LLSNYGNIDP VILASLADLD
PQNNHMVPYM WGTTGIGYNV DKIKSLLGKD VPVNTWALIF NPEIAGKLAS CGISLMDDAT
EVFAAAKIYL GIDASDFSKA TQEAVAALVA KTRKNIRYFH SSQYINDLAN GDLCVAHGYS
GDVLQARARA EEAEKGVNVA YTVPQEGAVV WSDVMVIPKD APNPKAAHAF INYLMQPEVI
ASASNAVAYA NANAKATPFV DEAIRNDPGV YPAEATRQRL VVLIAPSNNE TRAITRLWTR
IKTGK
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