| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1364 |
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| Symbol | |
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| ID | 3965844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1765301 |
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| End bp | 1766113 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920440 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_526838 |
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| Protein GI | 90021011 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCGCA TGCCCGTCTT ACTTATTATT TTAATTTTGG GCTACGTTTT TTTGTACGGT
CCAATTTTAA GCTTAATTGT GTACTCGTTT AACGCCAGTA AACTAGTTAC CGTGTGGAGT
GGCTTTAGCA CTAAATGGTA TGCAGCGCTT TTGCAAAATG ATGCGTTGTT GGAAGCTGCA
GGTCTAAGCG TAAAAATTGC AGCAGTGGTA GCAAGCTTAT CGGTGTTGCT AGGTACCCTT
GCCGCTATTG TATTAGTGCG CTACAAAAAA TCGCGCGGCA CCCGCAACTT AGCCATGCTT
GTAACCGCGC CAATGGTTAT GCCCGAAGTG ATTATTGGGT TGTCGCTGCT GCTACTATTT
ATCGCTATGG AAGATTTAAT AGGCTGGCCT AAAGGACGCG GCCAGCTCAC GATTATTTTG
GCGCACACCA CATTTGCCAT GGCTTACGTT ACGTTAATTG TACAAAGTCG CTTGGCCCAT
ATGGACCCAT CGCTAGAAGA AGTAGCAGAG GATTTAGGCG CACGACCAGC AACCGTGTTT
TTCGCCATTA CGCTGCCACT TATTGCACCG GCACTATTGG CCGGTTGGCT ATTAGCTTTT
ACGCTCTCGC TCGACGATTT GGTAGTGGCA AATTTTGTTT CAGGCCCGGG TGCCACCACG
CTACCTATGG TGGTGTATTC CAGCGTGCGT CTTGGCGTTA GCCCCGAAAT TAACGCACTT
GCCACGTTAA TAGTCGTGTT TGTAAGTGTT GCAGTTTGTG TATCGGGGTT TGTATTACAC
AGGCAGGAAA AACGACGAGA AGCAGAGCAG TAG
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| Protein sequence | MRRMPVLLII LILGYVFLYG PILSLIVYSF NASKLVTVWS GFSTKWYAAL LQNDALLEAA
GLSVKIAAVV ASLSVLLGTL AAIVLVRYKK SRGTRNLAML VTAPMVMPEV IIGLSLLLLF
IAMEDLIGWP KGRGQLTIIL AHTTFAMAYV TLIVQSRLAH MDPSLEEVAE DLGARPATVF
FAITLPLIAP ALLAGWLLAF TLSLDDLVVA NFVSGPGATT LPMVVYSSVR LGVSPEINAL
ATLIVVFVSV AVCVSGFVLH RQEKRREAEQ
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