| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1363 |
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| Symbol | |
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| ID | 3965843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1763868 |
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| End bp | 1765190 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637920439 |
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| Product | regulatory protein, LacI |
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| Protein accession | YP_526837 |
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| Protein GI | 90021010 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACAG AGTTGTTATC CCCCGCAGGA ACCCTTAAAA GCATGCGCTA CGCCTTCGCC
TATGGTGCAG ATGCCGTGTA TGCCGGCCAA CCGCGCTACA GCCTGCGTGT GCGCAATAAC
GAGTTTAATA AGATAGAAAA CCTTGCCTTG GCGGTAGATG AGGCGCATCA GCAGGGCAAG
AAGTTTTACC TAGCCAGTAA CCTTTCGCCC CACAACGATA AAGTGCGTAC CTATATACGC
GATTTAGAGC CTGTTATCGC CATGAAGCCA GATGCGCTAA TCATGGCAGA CCCAGGCCTG
ATTATGCTGG TGCGTGAGCA GTGGCCAGAT CAGCCTATCC ACCTAAGTGT GCAAGCGAAT
GCGGTTAACT ACGCCACGGT TAAGTTTTGG GCTAAGCAAG GCATAGAGCG GGTAATTTTA
TCTCGCGAGC TGTCTATCGA CGAAATAATC GATATTAGCC AAGAATGCCC AGATACCGAA
ATTGAAGTAT TTGTGCACGG CGCGCTGTGT ATTGCTTATT CTGGCCGTTG TTTGCTTTCT
GGCTACATGA CCCATCGCGA CTCCAACCAA GGTGCTTGCA CTAACTCCTG TCGCTGGGAA
TATAACTCCC ACGAAGCTAA AGAGAACGAG CTAGGTGATT TGATTGCCGT GGACACCAGC
TCACAGCCAC AGGCGTGGAC GCCCGATGAA GTGCAACCGG TGCTGCTACA GGAAAAAAGT
CGCCCCGGTG AATATATGCC TGCCTATGAA GATGAGCATG GCACTTACAT TATGAACTCC
AAAGATTTAC GCGCAGTGCA ACACGTAGAG CGTTTAGTGA AAATGGGCGT TCACTCATTA
AAAATTGAAG GTCGTACTAA ATCTCACTAC TACGTTGCGC GCACCGCACA GGTGTATCGC
AAAGCAATCG ATGCCGCCGA AGCCGGTATT CCATTTGATA TGAACCTTAT GCGCGAGCTA
GAGCATTTGG CAAACCGAGG CTACACCGAA GGCTTTTACC GCCGCCACGC GCCCAGCGAA
TATCAAAACT ACGAAAAAGG CGTTTCGAAT AACCCAGCGC AGCAATTCGT GGGCGAAGCC
ACGGGCTACG ATAAAACCAA CGGCTGGCTA ACCATAGAAG CGAAAAACAA ATTCTCGCAA
GGTGACCAAG TTGAGCTGAT CACACCTAAG GGTAATATCC CGTTTGTAGT GGGCGACATA
GCGAACAAAA AAGGCCAAAG TGTTGATTCT GCGCCTGGCT CTGGTCACAT TGTGCGCTTG
CCGCTAGAAG GCTTAGATTT AGGCGAAGAT GGCGGCTACG CTATGTTAAT GCGCCACTTA
TAA
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| Protein sequence | MATELLSPAG TLKSMRYAFA YGADAVYAGQ PRYSLRVRNN EFNKIENLAL AVDEAHQQGK
KFYLASNLSP HNDKVRTYIR DLEPVIAMKP DALIMADPGL IMLVREQWPD QPIHLSVQAN
AVNYATVKFW AKQGIERVIL SRELSIDEII DISQECPDTE IEVFVHGALC IAYSGRCLLS
GYMTHRDSNQ GACTNSCRWE YNSHEAKENE LGDLIAVDTS SQPQAWTPDE VQPVLLQEKS
RPGEYMPAYE DEHGTYIMNS KDLRAVQHVE RLVKMGVHSL KIEGRTKSHY YVARTAQVYR
KAIDAAEAGI PFDMNLMREL EHLANRGYTE GFYRRHAPSE YQNYEKGVSN NPAQQFVGEA
TGYDKTNGWL TIEAKNKFSQ GDQVELITPK GNIPFVVGDI ANKKGQSVDS APGSGHIVRL
PLEGLDLGED GGYAMLMRHL
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