| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1360 |
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| Symbol | |
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| ID | 3965309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1758535 |
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| End bp | 1760169 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920436 |
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| Product | cellulose binding, type IV |
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| Protein accession | YP_526834 |
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| Protein GI | 90021007 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGTCCCAC GCCGAGGATA CAGGAGCAAC ACATTGTCAG CATTACTTGG GGTAACCCCA
GAGCTTAAAG AAAGAATAAG AGGGCATTCT ACTCTCCGGC GATTTTTGGT CATTGTGGTT
ACATTGTCTA TCGCTTTTCC CGCGGTAATG TCGGGCGCGT TTCTAATCTA TCAAAATTAC
CAGCGAACCC TAGAACTAGA CAGTAAAGAA GCGGCGATGA ATTACGCTGA TTTGCTGCAA
GCGGGTATGA CTATGCCGCT GTGGGAAGTT GCGCCTTCTT TAGGGCAGCC CGTAATAGAT
TCACTGCGTT TAGACCCATC CATCGTTGCA ATTGATGTAG TTGATCAGCA AGGCAACACC
TTTCTTTCGT ATCACAACCC TAAAATAGAT GAAGGTTTTG GGGTAATTCA ATTTCAGCGG
GCTATTGAAT ATCAAAACAG TATTATCGGT GAGTTAAATT TCACTTATAG CTTGGCGGAT
GCGCAGCGGC AGGCAACAAA AGACTCTGAG CTACTGCTAA TCGTTATCGC AATTCAGTTA
CTCTTCTCGC TAGCTTGTTT AAGTTATTTT CTAAACCAGC GTGTTATTTC CCCCCTCAAT
AAGTTGGAAA AAGCAGCGGC AGGTATTGCG GGCGGTGATT TACGTACTTC TGTGCCGCAA
TTGTCGGGTG ATGAGTTTGG TTCTTTATCG CGCCAATTAG AAACTATGCG CTGGTCGTTA
GAGCGGTCAT TTACCCATAT GGAAGACCGA GTGGCAGAGC GAACTGCCGA GTTGGTAGAG
CTAAACAAAG AGCTTAACTC AACCGTAGAA CAATTAAATG CCACACAGGG CAACCTAGTT
CAATCCGAAA AGCTTGCTGC TCTTGGCTCG TTGGTTGCCG GGGTGGCGCA TGAGCTAAAC
ACTCCTATTG GCAACGGTTT GACAGTAGCC TCTACGCTAA ATGACAGCAC TAAACGCGTT
AAAAAAATGA TGGAAGAAGG TATAACTAAA AATGCCCTAC AAGACTTTCT TGAAGAAGCC
GAGGAAGGGT CTGGTTTAGT GTGTAAAAGC CTTGAGCGCG CATCGGAGTT GGTGAATAGT
TTTAAACAGG TTGCTGTAGA TCGAACAAGT GCCCAGCGCC GCTGTTTTGA TATGCTGGAA
ATGCTTAACG AAACACGTAT GACTCTTTCG CCAACACTCA AAAAGACGCC ATACCAAGTC
GAAGTAGATT GCCCCAGAGA TATCATGTTA GATAGCTACC CAGGCCCTTT AGGTCAGGTG
ATAACCAATC TTATTAACAA CTCTATTGTG CATGGCTTTG ATGGACGAGA ATTTGGTTGT
ATTCGTATAG TATGCAGAAA AGACGAAAAC GATATGCTGC GTTTAATTGT GGAAGATGAT
GGTAAGGGGA TTGCCGAAGA GCACATTAAT AGAATTTTCG ACCCGTTTTT TACCACCAAG
CTGGGCGAGG GGGGTAACGG GCTAGGGATG CATATTTTAC ATAATATAGT AACGGGTATG
ATGGGCGGCC AAGTCGTTGT AGAATCAAAA GTAAACGTAG GCACCAAATT TACAATAACA
ATGCCTGCAG TCTCTCCAAA TTACGATCAC GCTAACGACG GCACTGGCGG AGGATTTAAA
GTTAATGTCC GATAA
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| Protein sequence | MVPRRGYRSN TLSALLGVTP ELKERIRGHS TLRRFLVIVV TLSIAFPAVM SGAFLIYQNY
QRTLELDSKE AAMNYADLLQ AGMTMPLWEV APSLGQPVID SLRLDPSIVA IDVVDQQGNT
FLSYHNPKID EGFGVIQFQR AIEYQNSIIG ELNFTYSLAD AQRQATKDSE LLLIVIAIQL
LFSLACLSYF LNQRVISPLN KLEKAAAGIA GGDLRTSVPQ LSGDEFGSLS RQLETMRWSL
ERSFTHMEDR VAERTAELVE LNKELNSTVE QLNATQGNLV QSEKLAALGS LVAGVAHELN
TPIGNGLTVA STLNDSTKRV KKMMEEGITK NALQDFLEEA EEGSGLVCKS LERASELVNS
FKQVAVDRTS AQRRCFDMLE MLNETRMTLS PTLKKTPYQV EVDCPRDIML DSYPGPLGQV
ITNLINNSIV HGFDGREFGC IRIVCRKDEN DMLRLIVEDD GKGIAEEHIN RIFDPFFTTK
LGEGGNGLGM HILHNIVTGM MGGQVVVESK VNVGTKFTIT MPAVSPNYDH ANDGTGGGFK
VNVR
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