Gene Sde_1350 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1350 
Symbol 
ID3965299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1746399 
End bp1747508 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content47% 
IMG OID637920426 
Producthypothetical protein 
Protein accessionYP_526824 
Protein GI90020997 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTAGCC TGAGGGGGCG TAATGCTCGA GCGCTTGGTA TTAGTCAAAG CGGGGCCGCA 
TTATTAATTA TTCTCGCTAT TGTATTGGTG GGGTTTACGC TAGCATTAAC CTCAGTACTT
TCTATCAATG CTATTCGATT AAAGGGTACG CAAAAAAATA TTGAAGTAAT GGCGCAAGCG
AAAGAAGCGC TACTTGGCTA CGCGTTGAGG CAGCAGCCCG TTGGCGGCTT ACCGTGTCCA
GACACCAATG AAGATGGTTT TTCTAATACG ACAGGAGCCA ATTGCACAGC TTATTTGGGG
CGGTTGCCAT TTAAAACGCT ATCTTTGCCA GAGTTGCGTG ACAGTGAAGG AAATCGCTTA
TGGTACGCGG TAGATAGAAA TTTAGTTACC GTAAGTACTG CCACTAAAAA CCCGTCTTTA
CTCACCACGT TAACGTTAAA CGCACAATCG ACAGCAGCCA TCATTATCGC AGCGAATGGT
GTTGTCGAAG ATCAGGTACG CGGTAATACC ATAACCACTG CAGCGTATCT AGAAGGCGAA
AACGCTAGCG CCAATACCGC CTTTTTCGAG CAAGCAGTTA GCGAAATCAA CAACGATCAA
CTTCTTGGTA TTGGTTTAAC CGAATTTTGG AATTTGATGC AACGCAGTTA TTTGGCGCAA
GTGGCCAATG TATTGACAGC TTATAAAGGG GCTTGTGGCG AATACCCCTG GGCTGCGAGT
TTTGGTGGCC CGCCCTATAA CTCGGTAGAC CTACAACAAC GTGGCGCATT GCCATTACAT
TCTGCGTTAC CAGTGAATTG GAATACAGGA TGTGCAAGTG GTATTACCCC CTCTGCATGG
TGGTACAGTA ATTGGGGGAC AGAAGTTTAT TACAGCATGT GCACAGCGGC GCAAGGAAAC
TGCTTAACTA TTACGGGGGC TAGTCCATCT ACTCTGTCGG CTGTCACTAT TGCTCCCGGT
GTTGGTCTTG CAGGGCAGGC TCGCCCCTCG ACTGATCTTA CAAACTATTT TGAGCAGAGT
AACGCGAATG GAACTTCGCC CTTTGAATTT ATGAGTACGT TACAATTTAG CGAGAGTTTT
AATGATGTTG TCTATCCAAT CACCCCCTAG
 
Protein sequence
MTSLRGRNAR ALGISQSGAA LLIILAIVLV GFTLALTSVL SINAIRLKGT QKNIEVMAQA 
KEALLGYALR QQPVGGLPCP DTNEDGFSNT TGANCTAYLG RLPFKTLSLP ELRDSEGNRL
WYAVDRNLVT VSTATKNPSL LTTLTLNAQS TAAIIIAANG VVEDQVRGNT ITTAAYLEGE
NASANTAFFE QAVSEINNDQ LLGIGLTEFW NLMQRSYLAQ VANVLTAYKG ACGEYPWAAS
FGGPPYNSVD LQQRGALPLH SALPVNWNTG CASGITPSAW WYSNWGTEVY YSMCTAAQGN
CLTITGASPS TLSAVTIAPG VGLAGQARPS TDLTNYFEQS NANGTSPFEF MSTLQFSESF
NDVVYPITP