Gene Sde_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1348 
Symbol 
ID3965297 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1745344 
End bp1745919 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content40% 
IMG OID637920424 
Product6-phosphogluconate dehydratase 
Protein accessionYP_526822 
Protein GI90020995 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.685249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGTTT CACTGATTTA TCTCTCTATA ACCTTATATA TTCGTATAGC TAACGAAACG 
GAATTGGTCG AGTTGCGTGG TGCGGTTGTA CAACAGCGTC TAACAAACAA TACTTCATTT
ACTGAGCTGA GTGTTTTAAA TGCTAACGCA CCAGATTATG AACTATATCG TGAGCAAGGC
GTAATCGGCG AAGCAAACAA GTTAAATTGG ATAGAGCACT TAGATAGTGT TAGCAAAGAG
ATTGGCATAC CCAGTATTCA ATTTACTATC GAAAATACCA GAAAAGTACA GGAGGGTGAA
ACACCTTTTT ATCACTATGA AATTCCAATT TATGTAACAG AAATGTACCT AGATTTACTG
CTGTTGCATG AAGGGGATTT GTACCTGCTA CTTAACGAGA TGGCTTCGCG GGCCAATGGT
TTGTTTAGCG TTGAGGCCTG TGAACTACAG CGTATTGGCG CTAAAACGAG TAAAGCGCTT
TTCGAGGGGT TAAAGGGTAA GTGTCATTTG CGCTGGTTCA ATTTAGAAGA TATTACCCTT
GCTTGGCAAG ATGTGGAGGC GAGTTATGTT CCTTAA
 
Protein sequence
MAVSLIYLSI TLYIRIANET ELVELRGAVV QQRLTNNTSF TELSVLNANA PDYELYREQG 
VIGEANKLNW IEHLDSVSKE IGIPSIQFTI ENTRKVQEGE TPFYHYEIPI YVTEMYLDLL
LLHEGDLYLL LNEMASRANG LFSVEACELQ RIGAKTSKAL FEGLKGKCHL RWFNLEDITL
AWQDVEASYV P