Gene Sde_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1347 
Symbol 
ID3965296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1743690 
End bp1745312 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content42% 
IMG OID637920423 
Productglucose-6-phosphate dehydrogenase 
Protein accessionYP_526821 
Protein GI90020994 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGTGT TCGAATTCAA ATCGAACACT TTATCCGCTC GCTTGGATTT TAAATATGAT 
GAAGAGGGTA TAAAACAGTT TAAAGTATTG CTCAGCGATG GTATCCCAGT TACGAGCCGC
TTGTTAGTAG ATCTTAGAGA TGAAGACTTT ATAAGAGAGC AGGTGCCACA TGTTAGCGGC
AAAGATCGTC AGATAATGCT CGAAAGGCTA AAAGCGCGAA CATTTCGCGA TGCTAAATAT
CGGTATACAC GTATTCTAGG GCGTCGCGAT GATGGTCGTA GAGATGACAT GGTACTGCTT
TCTTCGCTGT TGGAAACAGA GCAGTTTACA GGGTGGATGC AACTATTCAG TGAACATAAT
ACGCCGCTGG TTGGTATTTG GTCTACGGCC TATTTAAGTG AGCAGATTAT TAAAAAGCTA
AAAATTAAAG ATGATAATGT GCTTTTTTTC TCTAGGCAGT CGAAAAGTGC CGTAAGGGAG
ACGCTGTTTA AAAAAGGAAA AATCTTTGTG TCTCGCCAAG CGAAGCTCGA GCGACGGGTG
AGAAAAGATA GATCCGCTGA AACCGCTGCA ACTATTGTGG CTACCAATGT TGAGGTTATG
CAGCGGTTTT TGGTGAACCA GCGTATTTTA GGGCCTGGTG AAGAGCTTAA CGTTTACAGT
ATTCTTCAAG ACCTCTACAT AGAAAAGGCA GAGATGTATT GTGAAGGCTC GGATCAACTT
AAATTCCATT TTGTAGGTAT TCGAGCTTTA GCCGAGAAAT TTGGTTTAAG TGTGCAGGGT
GATTTTGAAG CGGATACACT CTTTTCGTTT CTCTGCTCGA AACAACCACC GCATACACAA
ATCTACCTGT GTAAAGATCA AAAGTTACCA TATTATCGCT TTCTGATTCA GCAGATAATA
AAGGTGGCAA CGTTTGCCGG CAGTATCGCC TCCGTAATTA CGGCTACATT TTTACTATTA
AATTCGGCCG AATTTAATAA CATAAAAAGA ACCGAGCAGG CGAAGTTGCA ACGTTTTTCA
GAACTGTATA ATCAACAATA TAGCCAATTA GAGCACCGTA TCGCGGATGC GCAACGAATA
AAGGGTAGTG TGGATCTAAT CTATAATATA GAACGTGAAA CTGATCTTAA CCCTCAAGCA
CTCTTTCCAG CCATTGGCGG CATTTTCTCA GACCCAAATT TCTCATTATT TAGTATTCAA
AACTTGCAGT GGGAAAAGCA CACTCCAAAT GAGATTAATG CGATTGTGAG TGGCTATTCG
GATCTAAAAA CTGCAACCAT TCCCGACGGT GAGTATTTTG AAGAGTACGA AGAGGTTGAC
TACCAGTTTC AGCCCACACT TAGAATTTCT GGCACTATGG TAAAAAAGGG CGAAAAGTAC
AGCGATATTG TGCGTGCTAC AGAAGCATTG ATTTCACGCT TGTCGTCAAT TCACAATGTT
TCGGCCGTTC ATGTTTTGGC GCATCCGGTC GATGTTCGGC TAGGATCGAA ATTTAGTGAC
GAAGGCGGTG CGAAAGAAGA GGGCGCTCGC GAAAGTGATT TGTCTGCCAG CTTTGATTTT
AGATTGTTGC TAAAACCGGC CGAACCAATT AACCCAGAAG GAGAGTTGTA TGGGGAATAT
TGA
 
Protein sequence
MEVFEFKSNT LSARLDFKYD EEGIKQFKVL LSDGIPVTSR LLVDLRDEDF IREQVPHVSG 
KDRQIMLERL KARTFRDAKY RYTRILGRRD DGRRDDMVLL SSLLETEQFT GWMQLFSEHN
TPLVGIWSTA YLSEQIIKKL KIKDDNVLFF SRQSKSAVRE TLFKKGKIFV SRQAKLERRV
RKDRSAETAA TIVATNVEVM QRFLVNQRIL GPGEELNVYS ILQDLYIEKA EMYCEGSDQL
KFHFVGIRAL AEKFGLSVQG DFEADTLFSF LCSKQPPHTQ IYLCKDQKLP YYRFLIQQII
KVATFAGSIA SVITATFLLL NSAEFNNIKR TEQAKLQRFS ELYNQQYSQL EHRIADAQRI
KGSVDLIYNI ERETDLNPQA LFPAIGGIFS DPNFSLFSIQ NLQWEKHTPN EINAIVSGYS
DLKTATIPDG EYFEEYEEVD YQFQPTLRIS GTMVKKGEKY SDIVRATEAL ISRLSSIHNV
SAVHVLAHPV DVRLGSKFSD EGGAKEEGAR ESDLSASFDF RLLLKPAEPI NPEGELYGEY