Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1330 |
Symbol | |
ID | 3965944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1724437 |
End bp | 1725159 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637920406 |
Product | 3-oxoacyl-[acyl-carrier-protein] reductase |
Protein accession | YP_526804 |
Protein GI | 90020977 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01829] acetoacetyl-CoA reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGAT TAGCACTAGT GACTGGCGGT ACTCGGGGAA TTGGTGAAGC GATTTCAGTT CGTTTAAAAG AAGCAGGTTA TCGCGTTGTT GCTAGCTATG CAGGCAACGA TGAGAGCGCC AATAAATTCA AAGAAAAACA TGACATCCCC GTGATTAAAT TTGACGTATC TAGTTTTGAC GCGTGTACAG AAGCCGTTAA AAAAATCACT AGTGATATGG GGCCAATAGA AATTCTTGTT AACAATGCGG GCATTACTCG CGACAGCACT ATTCATAAAA TGAGTGCCGA GCAGTGGCAC CAAGTGCTGG ATACCAACCT TGGCTCTTGC TTTAACATGT GCCGCAACGT GATTGAAGCG ATGCGTGAAA ACAAGTTTGG TCGTATTGTT AATATTGGGT CTATAAACGG CCAGGCAGGC CAATATGGTC AAGTTAACTA CGCCGCTGCC AAATCTGGTA TTCACGGCTT TACTAAAGCA TTGGCACAAG AAGGGGCAAA CCAGGGCATT ACCGTAAACG CTATTGCGCC AGGCTACATT GCTACAGATA TGGTACGCGC AGTACCAGAA AAGGTGCTTG AAAAGATTAT TGCCAAAATC CCTGTTGGGC GATTGGGTGA GGCAGAAGAA ATTGCCCGTG GCGTAGAGTT TTTAGTATCT GATAACGCGG GCTTTATTAC TGGCTCTACC CTGTCAATTA ACGGTGGCCA ACACATGTAT TAA
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Protein sequence | MSRLALVTGG TRGIGEAISV RLKEAGYRVV ASYAGNDESA NKFKEKHDIP VIKFDVSSFD ACTEAVKKIT SDMGPIEILV NNAGITRDST IHKMSAEQWH QVLDTNLGSC FNMCRNVIEA MRENKFGRIV NIGSINGQAG QYGQVNYAAA KSGIHGFTKA LAQEGANQGI TVNAIAPGYI ATDMVRAVPE KVLEKIIAKI PVGRLGEAEE IARGVEFLVS DNAGFITGST LSINGGQHMY
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