| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1326 |
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| Symbol | |
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| ID | 3965940 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1720762 |
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| End bp | 1722558 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920402 |
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| Product | polyhydroxyalkanoic acid synthase |
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| Protein accession | YP_526800 |
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| Protein GI | 90020973 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAC AGGAACGCAT GCAAGTTCTT GGTTATATCG AAAAATACAG TGCAGAATTC
AGTAAATTAA CCGCCGATGT AATGAACCGA GTGTTAACCA ATACTATGGC TAGCGACGGC
AGTGAGCCGC CTGCGGGCTT GGTAATGCCC GAACAGGGCA GTGTGCGCAT TAACCCCGAG
CAATTTCTAA ACCAGCAAAT GCAGTTTATG CAGCAACAAC AACAGCTGTG GCAAAGCGCA
AGCCAGGCGT TTTTAGGGGG TAATGTAGAG ACGTTAATAG AGCCTGCAAA AGGCGACAAG
CGCTTTGCCG ACCCAGATTG GGATGGCAAC CCCGTATTTA ATTACATTAA GCAAGCTTAC
CTACTAAATG CGCAGTATAT GAATCAATTA GTCGACTCTA TGGAGTTCGA CGACCCAAAG
CTCGCAGAGC AGGTGCGTTT TTACACGCGG CAATATGTTA GCTCTGTAGC CCCTACCAAT
TTCTTACTCA CCAACCCCGA AGTGTGCAAA GAAATTTTGC AAACAGAAGG GGAAAATCTC
GCGCGCGGCA TGGATAACTT TATGCGCGAT TTAGAACAAA GCCCTACCGA AGCGTTAAAA
ATTACTCAGG TTAAAAGCGA CGCTTTTGTA TTGGGTAAAG ATCTCGCTAA TACCGAGGGT
GGGGTAGTGT TTAAAAATGA GCTTATTGAG CTTATACAGT ACAAGCCTAC TACCGAGCAG
GTACATTCTG TGCCGCTACT CATTTTGCCG CCGTTTATTA ACAAGTACTA CATACTTGAT
TTAGGTGAAA AGAAATCCCT TGTTAAGTGG TTGGTAAGCC AAGGGTTCAC CGTGTTTATG
GCCTCTTGGG TTAACCCCAA CAAGCAGCAT GCCACATTTG GCTTTGATGA ATATGTAGAG
TTGGGCGCTA TAGCCGCACT TGATGCAGTA TGCGAAATAA CCGGCGCAGA AAAAGTAAAC
GTGGCGGGTT ATTGTGTTGG TGGCACATTA CTGGGTATTA CCCAAAGCGT GCTTAAGGCC
CGTGGTGATA ACCGTATCAA TACCTGTACT TTTCTCACTA CGTTATTTGA TTTTTCTGAG
CCTGGCGAAG TGGGAAATTA CCTGTCGGAA GATAGCTTTG CGGTGATTGA AAAAACCGTA
AAAACCAAAG GCTACTTTGA CGGCCGAGTG CTGGCATTAA GCTTTAGCTT GTTGCGCGAA
AATAACTTGT TTTGGTCGTT TTTTATCGAT AACTACCTAA AGGGCAAAGA CCCAATGCCC
TTCGATATTT TGTATTGGAA TAGCGATTCC ACCAATGTGC CGGCGGCTGT GTATATTTAC
TATTTGCGCA ATATGTATTT AGATAACCAG CTCAAACACG CAGGTGCGCT TACCATTTGC
GATACCCCTG TAGACCTCGC TCAGGTGGGG GTGCCGAGTT ACTGTTTGGC CGCACAAGCG
GATCACATTG TGCTTTGGCA GGCCGCCTAT AAAAGCGCGC AAATACTCGC TAATAATGAA
GCCGCGCAAG TGCGCTTTGT GCTTACAGAG TCTGGCCATG TTGCCGGTGT GGTTAACCCC
ACAGACCGCG GCAAATATCC ACATTGGGTA AACGATACCT TAGCTGCGGA CGCCGAAAGC
TGGATGGCCG AAGCGAAACA GCAAGAGGGC TCGTGGTGGA GTGACTGGCG CGACTGGTTA
GCTGCAAGGG CGGGAGAGCA GTGTGCTGCA CCGGCAGTAG GCAGCAAAAA ACACCCAGTA
GTGGGTGATG CGCCGGGAAG CTATGTGAAG GTTAGGCTCG ATCATCAAGC CCTATAA
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| Protein sequence | MNQQERMQVL GYIEKYSAEF SKLTADVMNR VLTNTMASDG SEPPAGLVMP EQGSVRINPE
QFLNQQMQFM QQQQQLWQSA SQAFLGGNVE TLIEPAKGDK RFADPDWDGN PVFNYIKQAY
LLNAQYMNQL VDSMEFDDPK LAEQVRFYTR QYVSSVAPTN FLLTNPEVCK EILQTEGENL
ARGMDNFMRD LEQSPTEALK ITQVKSDAFV LGKDLANTEG GVVFKNELIE LIQYKPTTEQ
VHSVPLLILP PFINKYYILD LGEKKSLVKW LVSQGFTVFM ASWVNPNKQH ATFGFDEYVE
LGAIAALDAV CEITGAEKVN VAGYCVGGTL LGITQSVLKA RGDNRINTCT FLTTLFDFSE
PGEVGNYLSE DSFAVIEKTV KTKGYFDGRV LALSFSLLRE NNLFWSFFID NYLKGKDPMP
FDILYWNSDS TNVPAAVYIY YLRNMYLDNQ LKHAGALTIC DTPVDLAQVG VPSYCLAAQA
DHIVLWQAAY KSAQILANNE AAQVRFVLTE SGHVAGVVNP TDRGKYPHWV NDTLAADAES
WMAEAKQQEG SWWSDWRDWL AARAGEQCAA PAVGSKKHPV VGDAPGSYVK VRLDHQAL
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