Gene Sde_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1322 
Symbol 
ID3966093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1717417 
End bp1718217 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content43% 
IMG OID637920398 
Productvon Willebrand factor, type A 
Protein accessionYP_526796 
Protein GI90020969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAATT CAATCATTCA TAAGTTATGT ATCGTAATGG CGTTAACGTT CATGGTGGTG 
TCGCCTTTTT TGCTGGCCAA TACCGCCCAG GAAAAAGGCC GAGCTATTGC CGAAGAAGTG
GATAAGCGCG ATATAGGGTT TGGAGATTCT AAATCGAATA TAAAAATGCT GTTGCGCGAC
CAATACGGCA ATGAACGGCC ACGTTTAATG CGCAATCAAA CCATGGAGGT AACAGGGGAT
GGCGATAAGT CTATTATCGT ATTTGAAAAC CCCAGCGATG TAGAAGGCAC CGCGTTTTTA
TCTTTTACTC ACCAAGCTGG GCCAGATGAT CAATGGCTTT ATTTGCCCGG TTTAAAACGG
GTTAAGCGTA TCTCATCAAG CAACAAAGCA GGCGCCTTTA TGAACAGTGA GTTTGCGTTT
GAAGATATAG CATCACAGGA GGTGGATAAA TATACCTACA CATACTTGCG TGATGATGTG
CTTGATGGCA TTGACGTGTT TGTTAACCAA AGTGACCCAG TTGACCCCAA ATCTGGTTAT
TCCAAGTTGG AAGTGTGGAT AGACCAAGCG CGTTATATTC CACTAAAAAT AGATTTTTAT
GATCGCGGTG GACGCCTTAA AAAAACGCTG CATATGAAAG AGTATAACCA GTACTTAGAT
AAATACTGGC GTGCGCACCG CTGGGAGATG ACCAATCATC AAACGGGTAA AAGTACAGTG
TTGTTAATGT CCGACTGGCA ATTTAACAAC GGCTATACCG ACAACGACTT TAACAAAAAC
AGCTTATCGC GAGTTAAATA G
 
Protein sequence
MPNSIIHKLC IVMALTFMVV SPFLLANTAQ EKGRAIAEEV DKRDIGFGDS KSNIKMLLRD 
QYGNERPRLM RNQTMEVTGD GDKSIIVFEN PSDVEGTAFL SFTHQAGPDD QWLYLPGLKR
VKRISSSNKA GAFMNSEFAF EDIASQEVDK YTYTYLRDDV LDGIDVFVNQ SDPVDPKSGY
SKLEVWIDQA RYIPLKIDFY DRGGRLKKTL HMKEYNQYLD KYWRAHRWEM TNHQTGKSTV
LLMSDWQFNN GYTDNDFNKN SLSRVK