Gene Sde_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1319 
Symbol 
ID3966090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1713259 
End bp1714068 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content49% 
IMG OID637920395 
Producthypothetical protein 
Protein accessionYP_526793 
Protein GI90020966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT TAACAAATGA GCAATATAAG TTAAGCGTTG ATTTAGCTGG CGGGCGGGTG 
ATGGAATTTT CCCTTGCTGG TAAAAACCAC TTAGCTGATG CGGCGTTGTT TCCTGGTTCA
ACCATATGGA CAGCCCCGCA ATCGGATTGG GATTGGCCAC CACCACCGGC CCTAGATTCA
GAACCATATA GCGTTGTGCA TAGCGATGAG CAGACACTGG AATTAACGAG TGCGGTGTGC
TCGCAGCTCA ACATTCGTCT TGCTAAAGCA TTCTCTGCTA TTCCCCATGG TTTTCGTGTA
ACCACAACCA TTAACAATGT CTCTTCTCAA GCGCAAACTT ATGCTCCGTG GCAGGTGTCT
AGAGTGTTAG GTGGTCACAC CTATTTTTAC TCGGCAACCG GCCCGTTACC CAATTCAAAT
TTACCCATGC AGCGCGAGGG GAATGTATTT TTGTATGAGC ATAACCCCAA GCTGCTTACC
GAGGGGGTGA AATGCTTTGC GAATAATAGT GGTGGTTGGA TAGCCAATAT TTTTGCTGGG
CAAATATTTA TCAAAGGCTT CCCTAAGCTC GACGAAGCTG ATGTGTCTCC TAGTGAAGGA
GAGGTGGAAG TGTACGCCTT CGATAGCGAA AGCAACCCCT ATGTTGAGGT AGAAGTGCAG
GGGCCTTACA CAACCATTGC CTCTGGTGCG CAAACTAGCT GGGCCGTTGA TTGGTGGTTG
ATACCCGTGC CAGACGACTT CCCGCCGTTG GGGGCTATTG CAGAGGTCGG TCAAGCGCTA
GCGCAGATAG TGCAAGGGGT GAGCAAGTAA
 
Protein sequence
MKNLTNEQYK LSVDLAGGRV MEFSLAGKNH LADAALFPGS TIWTAPQSDW DWPPPPALDS 
EPYSVVHSDE QTLELTSAVC SQLNIRLAKA FSAIPHGFRV TTTINNVSSQ AQTYAPWQVS
RVLGGHTYFY SATGPLPNSN LPMQREGNVF LYEHNPKLLT EGVKCFANNS GGWIANIFAG
QIFIKGFPKL DEADVSPSEG EVEVYAFDSE SNPYVEVEVQ GPYTTIASGA QTSWAVDWWL
IPVPDDFPPL GAIAEVGQAL AQIVQGVSK