Gene Sde_1312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1312 
Symbol 
ID3966083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1703186 
End bp1704115 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content46% 
IMG OID637920388 
Producthypothetical protein 
Protein accessionYP_526786 
Protein GI90020959 
COG category[R] General function prediction only 
COG ID[COG1054] Predicted sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.406056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCAGA TTGTTATAGC CGCGTTATAT AAGTTTGTTT CCTTGCCCGA TTTCGAGGCA 
CTGCGAGAGC CGCTGCAGGC CTTTTGTATA GAGAATGAGA TAAAGGGTAC ATTGCTGCTC
GCGCAAGAGG GGATAAACGG CACTGTGGCT GGTAGGCGTG AGGCAATTGA TGCTCTGTTA
GCTTATTTCG GTAAAGATGC TCGGCTGGCA GATATAGACC ACAAAGAATC CTACGAAGAA
GAGCAGCCTT TTTATCGCAT GAAGGTAAAG CTCAAAAAAG AAATAGTCAC AATGGGCGTT
GAAGGTATAG ACCCCAACAA TATCGTGGGC ACCTACGTTG AGCCTAAAGA CTGGAATAGC
CTTATCGATG ACCCCGAAGT AATCGTTGTG GATACCAGAA ATAATTACGA ATACGATATT
GGCACTTTCG AAGGTGCGCT CAACCCCAAC ACTGAAAGTT TTCGCGAGCT GCCCGAGTAT
GTGGCTAAAA ACCTAGACCC AGCTAAACAC AAAAAAGTGG CGATGTTTTG TACAGGCGGA
ATTCGCTGTG AAAAATCTAC AGCGTTTATG AAACAGCGAG GGTTTGAAGA GGTTTATCAT
CTAAAGGGCG GTATTTTAAA ATACTTAGAA GAAGTGCCCG AAGAGCAAAC TCGCTGGAAA
GGGGAGTGCT TTGTATTCGA TAATCGTGTA GCTGTAAATC ACGCATTAGA AAAAGGTACC
TACGACCTTT GTCATGGTTG CCGCTACCCC ATTACCGAAG AAGATAAAAA ATCCGAAAAA
TATATAGAAG GGGTCGCTTG TCCGCATTGT CACGATACGC AAACGCCCGA TCAGCGAGCG
CGGTTTATGG AGCGCCAAAA ACAGGTGCAG CTAGCTAAGG CGCGCAAGCA GGCACATATT
GGTGCGCCAG CGCCAAGTAG GCAAAAATAG
 
Protein sequence
MPQIVIAALY KFVSLPDFEA LREPLQAFCI ENEIKGTLLL AQEGINGTVA GRREAIDALL 
AYFGKDARLA DIDHKESYEE EQPFYRMKVK LKKEIVTMGV EGIDPNNIVG TYVEPKDWNS
LIDDPEVIVV DTRNNYEYDI GTFEGALNPN TESFRELPEY VAKNLDPAKH KKVAMFCTGG
IRCEKSTAFM KQRGFEEVYH LKGGILKYLE EVPEEQTRWK GECFVFDNRV AVNHALEKGT
YDLCHGCRYP ITEEDKKSEK YIEGVACPHC HDTQTPDQRA RFMERQKQVQ LAKARKQAHI
GAPAPSRQK