Gene Sde_1311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1311 
Symbol 
ID3966082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1702778 
End bp1703089 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content50% 
IMG OID637920387 
Producttranscriptional regulator BolA 
Protein accessionYP_526785 
Protein GI90020958 
COG category[T] Signal transduction mechanisms 
COG ID[COG0271] Stress-induced morphogen (activity unknown) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.662079 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.161621 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGTAC AGCTTACTAT CCAGCAAAAG CTTCAATTAC AGTTTAGTCC GGTTCTTCTG 
GAGGTGCTGA ATGAAAGTCA CGGCCACAAT GTGGCCAAAG GGTCCGAAAC CCACTTTAAA
GTTGTTGCAG TAAGCGACGC ATTTGAAGGC TTGGGGTTGG TGAAACGCCA TCAAGCTGTT
TATGCAGCCT TGGCGGACGA GCTGGCCAGC GGAGTACATG CGCTGGCGCT ACATTTGTTT
ACGCCTAGTG AGTGGGAAGC CAATAAGGCA GACTTGGCCT CGCCTAAGTG TATGGGCGGC
AGTAAAAAAT AA
 
Protein sequence
MSVQLTIQQK LQLQFSPVLL EVLNESHGHN VAKGSETHFK VVAVSDAFEG LGLVKRHQAV 
YAALADELAS GVHALALHLF TPSEWEANKA DLASPKCMGG SKK