| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1307 |
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| Symbol | |
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| ID | 3966078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1698637 |
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| End bp | 1699899 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920383 |
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| Product | oxaloacetate decarboxylase |
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| Protein accession | YP_526781 |
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| Protein GI | 90020954 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1883] Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| TIGRFAM ID | [TIGR01109] sodium ion-translocating decarboxylase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0998305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0365188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCCTG GGCAGCTTTT CATGATTTTT GTGGGCATTC TGTTGCTGTT TTTGGCAATT
CGTAAAGGGT TTGAGCCTTT ATTACTTGTG CCAATTGGCT TTGGCGGCAT TCTAGCTAAC
ATCCCTGGCG CAGGGTTGGC CTTGCCGGCA GTCGAGAATG CCATTTTTGT TGCTGATCCT
GCCGTGTTGG CTGCCTTAGC CGACACGTTG GGGTTGACCA GCTGGGAATC GCCCAAGGAG
TTAGTGCATG CCTATGAGAT GGCTAGCCCC GCGGTTCACC ATGCAGCCCA TCAAGTTGCA
GTCGGCTATG GCTATTCTAA CGGCATGCTT TATAACTTTT ACTCGGTTGC TATTGCTAGC
GGCGTTGCGC CCCTGCTGAT TTTTATGGGT GTAGGGGCTA TGACCGATTT TGGTCCGCTC
TTAGCAAACC CTAAAACTCT CTTTTTAGGT GCTGCGGCTC AGTTTGGTAT TTTTGCAACC
GTACTTGGTG CAGTAGGCTT AGCAGCTACG GGTCAGATGG ACTTCACCAT TGCTGAGGCT
GCGGCCATCG GTATTATTGG TGGCGCTGAT GGTCCAACAG CAATTTATGT TGCCAGTAAG
CTGGCCCCCG ATTTACTGGG TGCAATTGCT GTTGCAGCAT ACTCGTATAT GGCGCTGGTA
CCTATGATTC AGCCGCCAAT CATGAAGCTG CTTACTACAG AGTCCGAGCG CAAAATTGTA
ATGACGCAAT TGCGAGCAGT AAGTAAACGC GAAAAAATCA CCTTCCCAAT TATGGTGTTG
GTGCTTGTAG CGTTAGTGTT GCCAAGCGCT GCGCCGCTAC TGGGGATGTT CTGCTTTGGT
AACTTGATGC GCGAGTGTGG CGTGGTAGAG CGTTTATCTG ATACGGCTCA GAATGCTTTA
ATCAACATCG TGACCATTTT CTTGGGGCTA AGTGTTGGTT CTAAGTTGGC TGCAGATAAG
TTCCTAGACC CTAAAACACT GGGTATTTTA GTGTTGGGTG TAGTGGCATT TGGTATTGGC
ACTGCCGCAG GCGTACTTAT GGCTAAGCTC ATTAACTTGG TGAGTAAGCA AAAGATCAAC
CCGCTTATTG GTTCTGCTGG GGTATCTGCT GTACCAATGG CGGCGCGAGT TTCAAACAAA
GTGGGCTTGC AGTCTAACCC TCAAAACTTC CTATTAATGC ATGCTATGGG CCCCAATGTG
GCCGGTGTTA TCGGGTCTGC CGTTGCTGCG GGCGTGATGA TTTCCATGGT TAGTGGTATG
TAA
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| Protein sequence | MMPGQLFMIF VGILLLFLAI RKGFEPLLLV PIGFGGILAN IPGAGLALPA VENAIFVADP
AVLAALADTL GLTSWESPKE LVHAYEMASP AVHHAAHQVA VGYGYSNGML YNFYSVAIAS
GVAPLLIFMG VGAMTDFGPL LANPKTLFLG AAAQFGIFAT VLGAVGLAAT GQMDFTIAEA
AAIGIIGGAD GPTAIYVASK LAPDLLGAIA VAAYSYMALV PMIQPPIMKL LTTESERKIV
MTQLRAVSKR EKITFPIMVL VLVALVLPSA APLLGMFCFG NLMRECGVVE RLSDTAQNAL
INIVTIFLGL SVGSKLAADK FLDPKTLGIL VLGVVAFGIG TAAGVLMAKL INLVSKQKIN
PLIGSAGVSA VPMAARVSNK VGLQSNPQNF LLMHAMGPNV AGVIGSAVAA GVMISMVSGM
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