| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1306 |
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| Symbol | |
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| ID | 3966077 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1696785 |
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| End bp | 1698575 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920382 |
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| Product | oxaloacetate decarboxylase |
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| Protein accession | YP_526780 |
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| Protein GI | 90020953 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
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| TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00193568 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0412594 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAAG CCAAAAAGCC ATTGGGCATA ACTGATGTGG TATTGCGAGA TGCGCATCAA
TCGTTGTTTG CTACTCGATT GCGCATTGAC GACATGTTAC CTATCGCAGA AAAATTAGAT
CAAGTTGGTT TTTGGTCGTT GGAATCTTGG GGCGGGGCAA CGTTTGATGC TTGTATCCGC
TATTTGGGCG AAGACCCATG GGACAGAATT CGCGAACTTA AGAAAGCCAT GCCTAACACG
CCTCAGCAAA TGTTGTTTCG CGGACAGAAC ATTCTAGGCT ACCGTCACTA TGCAGATGAT
GTTGTAGAAA AGTTTGTAGA GCGCGCGGCA GTAAATGGTG TGGATGTATT CCGAGTATTC
GACGCAATGA ATGATACTCG CAACTTGGAA ACTGCTTTAA AGGCCGTTAA AAAAGTTGGT
AAACATGCAC AGGGTACCAT TTCTTACACT TTAAGCCCGG TTCATAGCAT CGATAAATGG
GTTGAAATGG GCAAGCTGCT AGAAGATCTA GGTGCAGACT CCATTGCCAT TAAGGATATG
GCTGGTTTAT TAAAACCCTA TGACGGTTTT GAACTAGTGC AAAAATTAAA GGCCGCGTGT
GATATTCCAA TCCATATGCA GTGCCACGCT ACAACTGGCT TGGCCCACGC CACCATTCTT
AAGTGCGTAG AAGCAGGTAT TGATAACGTC GATACTGCTA TTTCGTCTAT GTCCATGACC
TATGGTCACA GCCCCACAGA AACGTTGGTT GCAACCCTTC AAGGTACAGA GCGCGATACC
GGCTTGGACC TAGAGTTGCT GGAAGAGATT GCTATCTACT TCCGCGAAGT GCGTAAAAAG
TACGCCAAGT TCGAAGGCTC TTTACGCGGT GTGGATTCAC GCATTCTTAC TGCTCAAGTT
CCTGGTGGCA TGCTCACCAA TATGGAAAGC CAGCTTAAAG AGCAGGGCGC AGAAGATAAG
TTTGATCAGG TACTGCAGGA AATTCCACGC GTTCGCGAAG ATTTAGGTTT TATTCCATTG
GTAACGCCAA CCTCTCAAAT TGTTGGCACA CAAGCTGTTA TGAACGTGCT AAGCGGAGAA
CGTTACGCGC GTATTTCTAA AGAGACAGAA GGCGTACTTA AAGGGCTTTA TGGCGCGACT
CCTGCACCAG TAAATAAAGA GTTGCAAGCT AAAGTGTTGG CTGAGGGCGA AGAAGTTATC
ACTTGTCGCC CAGCAGATTT ACTTGAGCCT GAGCTTGAAA AGCTCACCAA GGCGTTGTTA
GAAGAAGCGG CGGCTAAAAA TATCACCTTA GCTAAAGGTG ATAATCAAAT CGATGATGTG
CTTACTTACG CGTTGTTCAA CCAGATTGGC CTTAAGTTCC TTGAAAATAA AGGTAACCCA
GACGCATTTG AGCCTGCGCC AACCGGTAAA GAAACTGATG TTGTACTGGC GCCAAATGGC
GATGAAGTTT ACACCGTGAC AGTAGAGGGT GAGGACTACA CCGTAACCGT GAGCAATGGC
GGTGAGTTAA CCGGCATTGT GCCGTTAAGT GGCGCATCTT CATCGGGATC TTCTGCTTCT
AAGTCTGAAG TTTCGGGCGG TGAGCCGGTG CTAGCTCCGT TGGCGGGTAA TATTTTCCGC
GTCATGGTCT CTCCGGGTCA GCAGGTGGAA GAAGGTGACA CATTGTTAGT GCTTGAAGCT
ATGAAGATGG AAACCCAAAT TAGCGCACCT CACGCAGGCA TTATTGGTGC CGTAAACGTG
CGCGAAGGTG ATGTTGTAAC CGTGGGCGAT AACCTACTAA CCATTGCTTA A
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| Protein sequence | MSEAKKPLGI TDVVLRDAHQ SLFATRLRID DMLPIAEKLD QVGFWSLESW GGATFDACIR
YLGEDPWDRI RELKKAMPNT PQQMLFRGQN ILGYRHYADD VVEKFVERAA VNGVDVFRVF
DAMNDTRNLE TALKAVKKVG KHAQGTISYT LSPVHSIDKW VEMGKLLEDL GADSIAIKDM
AGLLKPYDGF ELVQKLKAAC DIPIHMQCHA TTGLAHATIL KCVEAGIDNV DTAISSMSMT
YGHSPTETLV ATLQGTERDT GLDLELLEEI AIYFREVRKK YAKFEGSLRG VDSRILTAQV
PGGMLTNMES QLKEQGAEDK FDQVLQEIPR VREDLGFIPL VTPTSQIVGT QAVMNVLSGE
RYARISKETE GVLKGLYGAT PAPVNKELQA KVLAEGEEVI TCRPADLLEP ELEKLTKALL
EEAAAKNITL AKGDNQIDDV LTYALFNQIG LKFLENKGNP DAFEPAPTGK ETDVVLAPNG
DEVYTVTVEG EDYTVTVSNG GELTGIVPLS GASSSGSSAS KSEVSGGEPV LAPLAGNIFR
VMVSPGQQVE EGDTLLVLEA MKMETQISAP HAGIIGAVNV REGDVVTVGD NLLTIA
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