Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1300 |
Symbol | |
ID | 3965321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1690011 |
End bp | 1691237 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637920374 |
Product | aspartate kinase |
Protein accession | YP_526774 |
Protein GI | 90020947 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0527] Aspartokinases |
TIGRFAM ID | [TIGR00656] aspartate kinase, monofunctional class [TIGR00657] aspartate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000018313 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0162978 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCTAT TTGTACAAAA ATTTGGTGGT ACATCAGTAG GAACGGTTGA GCGCATAAAA GCTGTTGCTA AAAAAGTAGC AGGTTTTCGC GATCAGGGGC ACGATATTGT TGTTGCCGTT TCTGCAATGA GCGGCGAAAC CAATCGATTG ATTGCTTTGG CTAAAGAGAT GCAGGCAACT CCTGATCCGC GTGAGATGGA CGTGCTGGTG TCTACCGGTG AGCAGGTAAC TATCGCTTTA ATGTGTATGG CACTTAAAGA TCTTGGTTAC GATGCTCGCT CGTATACGGG TACGCAGGTG AAAATTCTCA CCGATAGCTC TCACATGAAA GCCCGTATTC AAGATATTGA CGTAGCACCC ATGAAGGCAG ACTTAGCTGC AGGCCGTGTG GTAGTTGTAG CCGGTTTCCA AGGCGTAGAC GAGAATGGCA ATATCACTAC ACTCGGGCGA GGTGGCTCGG ATACCACTGG CGTTGCTTTG GCTGCAGCTT TAAAAGCTGA TGAGTGCCAA ATCTATACCG ATGTAGATGG CGTTTATACA ACAGACCCAC GAGTGGTAAG CAGTGCTAAG CGATTAGAGC GCATTACCTT CGAAGAAATG CTCGAGATGG CTAGCTTGGG GTCGAAAGTT TTACAAATTC GCTCGGTAGA GTTTGCCGGC AAATACAACG TACCGTTACG TGTGCTATCT ACTTTTGACG ATGGCCCCGG AACTTTGATC ACCCTCGATG AGGAATATTC TACAATGGAA CAACCCGTTG TTTCTGGCAT AGCGTTTAAC CGCGACGAAG CCAAAGTGTC TATTTTAGGT ATCCCAGATG CACCAGGTGT AGCATCTAAA ATATTGGCTC CAATTGGCGA CGCTAATATT GAAATTGACG TTATCGTGCA AAACGTTGCT GCGGATAACA CTAACGACCT TACATTTACT GTTAATCGCG CAGATGTTGA TAAGGCGCGT GCAGTTGTAG AGCGTGTAGC AACTGAATTA GGTGCTCGTG AGGTTGTTAC TGACGACAAA ATTGCAAAAA TCTCGATAGT AGGGGTGGGT ATGCGCTCCC ATGCTGGCGT CGCTTCTACT ATGTTTAAGT CTCTGGCTGC AGATGCTATT AATATTCAGA TGATTACCAC ATCTGAGATT AAGATCTCTG TAATCATTGA TGAGCGTTAT TTAGAACTGG CTGTTAGAGG CCTTCACACT GCGTTTGGTT TGGATAAAGA CCAGTAG
|
Protein sequence | MSLFVQKFGG TSVGTVERIK AVAKKVAGFR DQGHDIVVAV SAMSGETNRL IALAKEMQAT PDPREMDVLV STGEQVTIAL MCMALKDLGY DARSYTGTQV KILTDSSHMK ARIQDIDVAP MKADLAAGRV VVVAGFQGVD ENGNITTLGR GGSDTTGVAL AAALKADECQ IYTDVDGVYT TDPRVVSSAK RLERITFEEM LEMASLGSKV LQIRSVEFAG KYNVPLRVLS TFDDGPGTLI TLDEEYSTME QPVVSGIAFN RDEAKVSILG IPDAPGVASK ILAPIGDANI EIDVIVQNVA ADNTNDLTFT VNRADVDKAR AVVERVATEL GAREVVTDDK IAKISIVGVG MRSHAGVAST MFKSLAADAI NIQMITTSEI KISVIIDERY LELAVRGLHT AFGLDKDQ
|
| |