Gene Sde_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1297 
Symbol 
ID3965318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1686568 
End bp1686759 
Gene Length192 bp 
Protein Length63 aa 
Translation table11 
GC content45% 
IMG OID637920371 
Productacetoacetyl-CoA reductase 
Protein accessionYP_526771 
Protein GI90020944 
COG category[S] Function unknown 
COG ID[COG2835] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.199005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00515811 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTAGATC AAAAATTACT CAGCTTGTTG GTGTGCCCAG TCACTAAAGC ACCGCTAATA 
TACGACGAGC CAAAACAAGA GTTGGTATGT GTTGCTAGCG GTCTTGCTTA TCCTATTCGT
GACGGTATTC CGGTGATGTT GGAAGGCGAG GCGCGCGTAC TCTCTCAGGA AGAAAAAGAA
AGCTATAAAT AG
 
Protein sequence
MLDQKLLSLL VCPVTKAPLI YDEPKQELVC VASGLAYPIR DGIPVMLEGE ARVLSQEEKE 
SYK