| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1291 |
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| Symbol | |
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| ID | 3965312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1654333 |
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| End bp | 1656468 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920365 |
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| Product | 3-hydroxybutyrate dehydrogenase |
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| Protein accession | YP_526765 |
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| Protein GI | 90020938 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR03375] type I secretion system ATPase, LssB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGATAAAA CAGAAGACAC TGTCGGTTCA AAAGACCCTC TTTTACTGTC GTTGATGGCT
ATTGCTCGCT ATGAGCACGT CGCTTGTTCA GACACCATGC TTGTGTCTGG GTTGCCATTG
CATGAAGGCC GTCTTACGCC AGAGTTGCTA GTTCGCGCTG CAAGTCGCAT AGATATGAAA
GCATCGGTGG TTGAACGCAC TATCGATCAA ATATCCAACT TGGTATTGCC CGCCATACTT
ATTCTTAAAG ACAACCAAGC ATTGGTGTTG TTAGATATTG CAGATAACAA CTCTGTCGCA
CAGGTATATT GCCCCGAGCA GGATGCTGAA CAAGAAATAT CCATTCCCGA CTTACTCCAG
CAATACACAG GCTTAGCCAT ATATATAAAG CCCGAAACCC ATTACGAAGC CCGCGCTCTT
CACGATATAG CACCTAAGAA AGCACACTGG TTTTGGGGGA CGCTAAGCCA TAGCTGGCGA
ATTTACCGCG ATGTATTGGT GGCTTCATTT CTAATTAACC TCTTTGCGCT TGCGAACCCG
CTGTTTGTAA TGAATGTGTA CGATCGGGTG GTACCCAATA ATGCAATCGA GACGTTGTGG
GTGCTAGCAC TTGGTGTATC AGTTGTTTAC ATTTTTGATT ACATCTTAAA AACGTTACGG
GTGCATTTTA TAGAGGTGGC GGGTAAAAAG TCGGATGTAC TGCTGTCAGC GTATATTTTT
GAGCGAGTGC TTGGCGCGAA GTATGATCAG CATCCTCCTT CTGTAGGGGC TTTTACTGGG
CAGCTGCGCG ATTTTGATTC TGTAAGAAAC TTTATTACTG CAACGTCGGT TACCGCGTTT
GTCGACTTGC CCTTTACCGT GCTCTTTTTG GTGGTTATCG GCTATTTGGG CGGCCCAATC
GTATGGATTC CCATAGTAAT TATTCCACTT ATTATTATTT TTTCCTTGGT CGTGCAGGCC
ATGCTCAATA AAGCGGTTGC CAACACCTTT GTCGCATCCG CCCAAAAAAA TGCCACTATG
GTGGAAGCTA TTACTAATTT GTCGTTGGTT AAGGTGTTGA ACGCCGAGGG CAAAATACTG
CGCAACCTAG AAAAGGCTGT TGGGTTGTTG GCTTATTGGG GTGTTAAAAC CCGCGTGCTT
TCTAATAGCG CGACTGGCTT TGCTGGTTTT ATGCAGCAAA TGGCTTCTGT TTTGGTGGTT
ATTGTTGGTG TGTATTTAAT TAGCGCCGGC GAATTAACCA TGGGTGGTTT AATTGCATGT
GTGTTGCTAA CCACGCGTTC TCTTATGCCT TTAGCGCAGG TAGCTGGCTT ATTGGTTCAA
TTCCAGCAGT CGAAAATGGC GTTAACCTCA CTTGAAGAGA TTGTAAATAG GCAGCAAGAG
CGGCCAAACG ACAGACACTT TATAAAACGT ATTAAATTGC AGGGTAATGT GGAGTTTAAA
GGGGTGAACT TTGTTTACCC TGGCGATGAT CAGCCAACAC TCAAAGATGT AAGCTTTTCG
TTAAAAGAGG GGGAGAAGGT AGCGTTAATT GGTCGATTGG GGTCTGGTAA ATCGACAATG
AATAATTTAA TAGCTGGTTT ATATCAGCCT ACCAGTGGTG CCATTCTTAT TGATGGCATA
GATATTAAGC AAATAGACCC CGCAGAGCTG CGAGCCAATC TTGGTTATGT CCCTCAAGAT
AGCTCTTTAT TCTATGGCTC AATAAAAGAC AACATTGCTT ATCGCGATGT ATACGTTGAC
GATCAAGAGA TCATCCGCGT GGCAGAAGTG GCTGGTGTAT CTGCATTTAG TAATCTTCAT
CCCCATGGTT TGGCTCGAAT GATAGGCGAG CGTGGAGACA ATTTATCCGG CGGTCAGAGG
CAGGCGATAT CTATTGCGCG AGGCTTGGTG AATAGCCCTG CATTGGTGCT TTTAGATGAG
CCTACATCTG CAATGGATAA TGCGAGTGAA GCCAAGTTAA TGGAAAACCT TAAAGAAGAG
CTGGCCGATA AAACGGTAAT AATGGTTACT CATAAAACGT CATTGCTTCG ATTGGTAGAC
AGGGTAATAG TAATGGATAG TGGCCGCATA GTTGCCGATG GTCCGAAAGA TACCGTGTTA
GAAGCACTTA AAAAGGGGCA GGTCCGTGTC AGCTAA
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| Protein sequence | MDKTEDTVGS KDPLLLSLMA IARYEHVACS DTMLVSGLPL HEGRLTPELL VRAASRIDMK
ASVVERTIDQ ISNLVLPAIL ILKDNQALVL LDIADNNSVA QVYCPEQDAE QEISIPDLLQ
QYTGLAIYIK PETHYEARAL HDIAPKKAHW FWGTLSHSWR IYRDVLVASF LINLFALANP
LFVMNVYDRV VPNNAIETLW VLALGVSVVY IFDYILKTLR VHFIEVAGKK SDVLLSAYIF
ERVLGAKYDQ HPPSVGAFTG QLRDFDSVRN FITATSVTAF VDLPFTVLFL VVIGYLGGPI
VWIPIVIIPL IIIFSLVVQA MLNKAVANTF VASAQKNATM VEAITNLSLV KVLNAEGKIL
RNLEKAVGLL AYWGVKTRVL SNSATGFAGF MQQMASVLVV IVGVYLISAG ELTMGGLIAC
VLLTTRSLMP LAQVAGLLVQ FQQSKMALTS LEEIVNRQQE RPNDRHFIKR IKLQGNVEFK
GVNFVYPGDD QPTLKDVSFS LKEGEKVALI GRLGSGKSTM NNLIAGLYQP TSGAILIDGI
DIKQIDPAEL RANLGYVPQD SSLFYGSIKD NIAYRDVYVD DQEIIRVAEV AGVSAFSNLH
PHGLARMIGE RGDNLSGGQR QAISIARGLV NSPALVLLDE PTSAMDNASE AKLMENLKEE
LADKTVIMVT HKTSLLRLVD RVIVMDSGRI VADGPKDTVL EALKKGQVRV S
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