| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1286 |
|---|
| Symbol | |
|---|
| ID | 3965268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | - |
|---|
| Start bp | 1650835 |
|---|
| End bp | 1651275 |
|---|
| Gene Length | 441 bp |
|---|
| Protein Length | 146 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637920360 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_526760 |
|---|
| Protein GI | 90020933 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAGC TGATATTTAA GTGTGTTGTG GTTGTGGTGC TGGCCCTTGG GGCCTCGAAC
TACATGATGT ATATAATGAC AGGGAAGCTG CCTTTCTCTA CAGAAAGCCT ACCTAGCTTT
TCTAGCCCCA GCTTACCGAC TTTTGCCGAG GGGAAAACCA CCGCATATAA ATGGACTGAC
GCAAACGGGG TAGTCCACTA CTCCTCCGAG CCGCCACCCA ACCCTGCAGA ATCTGCCGTA
AAAATGGAAG TAGACCCGAA TGTAAACCTC ATACAAGGCA TTAAAGAGGA GCCCACCATT
GCAGGGGAAA CCGATACTCC ACAAGGGCCG GACTTTAGCG GCAACATATA TAGCCCAGAA
AAAGTAAAAA AATTAGTCGA TGACGCCAAA GCTGTACAGC AACAAATGAA TGAACGAACC
AAAAGCCTTG AGGGCATTTA A
|
|---|
| Protein sequence | MKKLIFKCVV VVVLALGASN YMMYIMTGKL PFSTESLPSF SSPSLPTFAE GKTTAYKWTD
ANGVVHYSSE PPPNPAESAV KMEVDPNVNL IQGIKEEPTI AGETDTPQGP DFSGNIYSPE
KVKKLVDDAK AVQQQMNERT KSLEGI
|
|---|
| |