Gene Sde_1281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1281 
Symbol 
ID3965263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1643219 
End bp1644469 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content47% 
IMG OID637920355 
Producthypothetical protein 
Protein accessionYP_526755 
Protein GI90020928 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000210096 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.378196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATAA AACTAATACC CAACTTCGTT ACAGCAGCCT TGCTATCACT AAGCGCGTAT 
AGCTGCGCAG TAACCCCTGC CACCCTAGAG CAGACATTTA CACTCGACGC CCACAACCCC
TTAGCGGTTT CACGCAAGGG TGAGCAAACA CTTATCCCGC TTGCTTTACT TAATCTAGAC
GACGACACCA ATAACTCAAC ATACGTAGCC CAAATAAACG GCTCGTTCGT GCCTAGCCAA
CTAGTAGATA CCGATGCAGA TGGCCAACAG GACTCGCTAC TGCTTATTAC TGACTATGCA
CCGAACGCGA AAGTACGTAT TCATGTAAGT ACGCTGAGAG GCGGCAAACT TAACCCTCAG
TACACTCCGC TCACACAGGC GGAAATGGGT GTGAGAGTTG GCGGTAAAAA AGTGGGCGAA
ACTTGGCAAG GTGGCGAATA CCAACAGGTT AATGAACTAA CAAACCCCGC CAGTCACACC
ATTGGCGATA AGCTATATAA ATACGAAGGC TTTGGCTGGG AATCAGACTT AATGGCTTAC
CGCTTTTATT TCGATGAGCG CGGCCTAATT GATATTTTTG GCAAGCGCAC GCCCGACTTA
GTGCTTCACG AAGTAGGGTT AGACGGCGGC GACTACCATG CAATGAACGA CTGGGGCATG
GATGTATTAA AGGTTGGTCC TTCGCTTGGC TTAGCTGGCG TAGCCGCGTG GCAGAATGAA
GCGATCCAAC CAATCCAAAA TGTAGACTCG CTATCGGTAA AACTACAAAG CGGACCATTG
CACTCCCATG CAACTGTTGA GCAAACAGGC TGGAAACTAG GCGAGCAAGC CATTGATTTA
CGTCGCCGAT ATAGCATTAA CGCCCACTCC CACCTCACCT ATGTGCAAGC ATTCACTAAA
CAAGAGATCC CACAACTAGC GGTTGGCATA GTTAAACACA ACGTAGAGAA GCTAAGTTAT
TTAGATGAGC AAAGCGAATG GCTATACCTA GCAACGTTTG GCGAGCAGAG CCTAGCCGAC
GACCAACTTG GAATGGCTAT TTTTTTTCGA GCGAGTGATT TACACAAAGT TACCGAAGAT
GAGTTAAATG AACTAGCGGT GTTAAACGCC AGTAAAAACC TAGATTTTTA CTTTGCTGCA
CGCTGGGCAG GCGAGGCAAG CCCCATTACC ACTAAACAAC AATTTTTGAA CTATTTAGAA
ACTACCCGCC AAGCACTTAA CAACCCAATT AAAGTGACTC GCGCAAAATA G
 
Protein sequence
MRIKLIPNFV TAALLSLSAY SCAVTPATLE QTFTLDAHNP LAVSRKGEQT LIPLALLNLD 
DDTNNSTYVA QINGSFVPSQ LVDTDADGQQ DSLLLITDYA PNAKVRIHVS TLRGGKLNPQ
YTPLTQAEMG VRVGGKKVGE TWQGGEYQQV NELTNPASHT IGDKLYKYEG FGWESDLMAY
RFYFDERGLI DIFGKRTPDL VLHEVGLDGG DYHAMNDWGM DVLKVGPSLG LAGVAAWQNE
AIQPIQNVDS LSVKLQSGPL HSHATVEQTG WKLGEQAIDL RRRYSINAHS HLTYVQAFTK
QEIPQLAVGI VKHNVEKLSY LDEQSEWLYL ATFGEQSLAD DQLGMAIFFR ASDLHKVTED
ELNELAVLNA SKNLDFYFAA RWAGEASPIT TKQQFLNYLE TTRQALNNPI KVTRAK