Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1281 |
Symbol | |
ID | 3965263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1643219 |
End bp | 1644469 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637920355 |
Product | hypothetical protein |
Protein accession | YP_526755 |
Protein GI | 90020928 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000210096 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.378196 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTATAA AACTAATACC CAACTTCGTT ACAGCAGCCT TGCTATCACT AAGCGCGTAT AGCTGCGCAG TAACCCCTGC CACCCTAGAG CAGACATTTA CACTCGACGC CCACAACCCC TTAGCGGTTT CACGCAAGGG TGAGCAAACA CTTATCCCGC TTGCTTTACT TAATCTAGAC GACGACACCA ATAACTCAAC ATACGTAGCC CAAATAAACG GCTCGTTCGT GCCTAGCCAA CTAGTAGATA CCGATGCAGA TGGCCAACAG GACTCGCTAC TGCTTATTAC TGACTATGCA CCGAACGCGA AAGTACGTAT TCATGTAAGT ACGCTGAGAG GCGGCAAACT TAACCCTCAG TACACTCCGC TCACACAGGC GGAAATGGGT GTGAGAGTTG GCGGTAAAAA AGTGGGCGAA ACTTGGCAAG GTGGCGAATA CCAACAGGTT AATGAACTAA CAAACCCCGC CAGTCACACC ATTGGCGATA AGCTATATAA ATACGAAGGC TTTGGCTGGG AATCAGACTT AATGGCTTAC CGCTTTTATT TCGATGAGCG CGGCCTAATT GATATTTTTG GCAAGCGCAC GCCCGACTTA GTGCTTCACG AAGTAGGGTT AGACGGCGGC GACTACCATG CAATGAACGA CTGGGGCATG GATGTATTAA AGGTTGGTCC TTCGCTTGGC TTAGCTGGCG TAGCCGCGTG GCAGAATGAA GCGATCCAAC CAATCCAAAA TGTAGACTCG CTATCGGTAA AACTACAAAG CGGACCATTG CACTCCCATG CAACTGTTGA GCAAACAGGC TGGAAACTAG GCGAGCAAGC CATTGATTTA CGTCGCCGAT ATAGCATTAA CGCCCACTCC CACCTCACCT ATGTGCAAGC ATTCACTAAA CAAGAGATCC CACAACTAGC GGTTGGCATA GTTAAACACA ACGTAGAGAA GCTAAGTTAT TTAGATGAGC AAAGCGAATG GCTATACCTA GCAACGTTTG GCGAGCAGAG CCTAGCCGAC GACCAACTTG GAATGGCTAT TTTTTTTCGA GCGAGTGATT TACACAAAGT TACCGAAGAT GAGTTAAATG AACTAGCGGT GTTAAACGCC AGTAAAAACC TAGATTTTTA CTTTGCTGCA CGCTGGGCAG GCGAGGCAAG CCCCATTACC ACTAAACAAC AATTTTTGAA CTATTTAGAA ACTACCCGCC AAGCACTTAA CAACCCAATT AAAGTGACTC GCGCAAAATA G
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Protein sequence | MRIKLIPNFV TAALLSLSAY SCAVTPATLE QTFTLDAHNP LAVSRKGEQT LIPLALLNLD DDTNNSTYVA QINGSFVPSQ LVDTDADGQQ DSLLLITDYA PNAKVRIHVS TLRGGKLNPQ YTPLTQAEMG VRVGGKKVGE TWQGGEYQQV NELTNPASHT IGDKLYKYEG FGWESDLMAY RFYFDERGLI DIFGKRTPDL VLHEVGLDGG DYHAMNDWGM DVLKVGPSLG LAGVAAWQNE AIQPIQNVDS LSVKLQSGPL HSHATVEQTG WKLGEQAIDL RRRYSINAHS HLTYVQAFTK QEIPQLAVGI VKHNVEKLSY LDEQSEWLYL ATFGEQSLAD DQLGMAIFFR ASDLHKVTED ELNELAVLNA SKNLDFYFAA RWAGEASPIT TKQQFLNYLE TTRQALNNPI KVTRAK
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