| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1274 |
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| Symbol | |
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| ID | 3965256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1633449 |
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| End bp | 1634585 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637920348 |
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| Product | Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit |
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| Protein accession | YP_526748 |
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| Protein GI | 90020921 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
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| TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000453292 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.267314 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACTGG TAATTGGGGT TGTACGAGAA AGTGCTCTGG GAGAATCCCG AGTAGCAATT
GCGCCGGATG TTGTGCAAAA ACTTAATAAA CTAGGTGTTC AGGTTGTTAT GCAGCAGGGC
GCTGGTGCGT CGGCTTTTTT GCCAGACGAA AAATACAAGC AAGATAATGT AACGCTGGTA
GAAAGTGCGG CAGATGTATA CGCCAAAGCG AATTTATTCA TTCGTGTACA AACTCCTTCA
CTCGATGAAA TAGCGCAAAT GCCTGAGGGC AGCTATTTGC TGGGCGCGTT GACGCCTCAT
AAACACCTAG CAGAAATTAA AGCGTTAGCA GATAAAAAAA TAACCTGCTG GGCAACCGAA
TATATTCCGC GTATTTCAAG AGCGCAAAGT ATGGATACGC TCTCTTCTCA GGCGGCGGTG
GCTGGTTATG TTGGCGTTGT AAAAGCCGCG GGCTTAAGTG CGAAATTTTT TCCAATGCTA
ACAACCGCTG CGGGCACTGT GCGGCCAGCC AAAGTATTGG TATTGGGTGC TGGTGTTGCT
GGCCTGCAGG CTATAGCAAC GGCTAAACGC TTAGGTGCGG TTGTGGAGGC GTACGATATT
CGTCCCGAAA CCAAAGAGCA GTGCGAATCG TTAGGCGCTA AGTTTATTGA TACTGGTGTG
AATGCAGCAG GTGAGGGCGG CTATGCTCGT GAGCTGACTG CAGAGGAAGT TGTCAAGCAA
ACAGAAATTG TTGATCAACA TATTGCGAAA GCCGATGCTG TTATCACAAC AGCTGCTATT
CCTGGTCGAC CTTCGCCTAA ATTAATTAGC GCGAGTGCAG TAGCGAAAAT GCAACCCGGT
GCGGTGATTA TCGACTTGGC TTCTGAGGGC GGTGGTAACT GTGAGCTGAC TAAACCCGGT
GAAATTTACC AGCATGAAGG TGTTGTTATT TGTGGTGAAT TGAATGTGCC AGCACAGCTA
GCGGTACATG CATCGGAAAT GTTTAGTAAA AATTTATTTA ACTTTATTTC CCCTTGGTTA
AAAGACGCAC AGCTAGTAGT AGATTGGGAA GATGAAATTA TTTCTCAGTC CTGCTTGGTT
AAAGAGGGCG AAGTAGTAAA TAGCCGTATA CAAACTCTGT TAGGAGGTGG GGCATGA
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| Protein sequence | MKLVIGVVRE SALGESRVAI APDVVQKLNK LGVQVVMQQG AGASAFLPDE KYKQDNVTLV
ESAADVYAKA NLFIRVQTPS LDEIAQMPEG SYLLGALTPH KHLAEIKALA DKKITCWATE
YIPRISRAQS MDTLSSQAAV AGYVGVVKAA GLSAKFFPML TTAAGTVRPA KVLVLGAGVA
GLQAIATAKR LGAVVEAYDI RPETKEQCES LGAKFIDTGV NAAGEGGYAR ELTAEEVVKQ
TEIVDQHIAK ADAVITTAAI PGRPSPKLIS ASAVAKMQPG AVIIDLASEG GGNCELTKPG
EIYQHEGVVI CGELNVPAQL AVHASEMFSK NLFNFISPWL KDAQLVVDWE DEIISQSCLV
KEGEVVNSRI QTLLGGGA
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