Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1271 |
Symbol | |
ID | 3965253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1628441 |
End bp | 1629913 |
Gene Length | 1473 bp |
Protein Length | 490 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637920345 |
Product | D-mannonate oxidoreductase |
Protein accession | YP_526745 |
Protein GI | 90020918 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.291275 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACC TACACCTAAA CTACGAATCT CTTTCGAACG TGCTTGACCC TGTAAAAAAG CCACAGTACA CGCCAAGCGA ACACCGCAGC GGCATAGTCC ATATTGGCAT TGGTGCCTTT CACAAAGCGC ACCAAGCCGT GTTTACCGAC GATGTATTAA ACATGCACGG CGGCGACTGG CGCATTACTG CAGTAAGCTT ACGCAGGCCC GATGCACGCG ATCAACTTGA AAAACAAAAC AGTTTATATA CCGTCGTAGA AAAATCAGAC GGTGAAATTT CACCGCGAAT TATTGGCGCG GTGGAAAAAG TTTTGGTTTG CCCCGAAGAC CCACAACAAG TCATCAATAC AATTGCCAGC ACCGACATTA AAATTGTATC GCTAACCATT ACTGAAAAAG GCTATTGCCA AAAAAATGGA ACCTTAGATA CATCCAATGT AGATATCGCT CACGATCTAA ATAACTTAAG CGCCCCAAAA AGTATGCCTG GGTTAATTGT CGCAGCTTGC GCGGCAAGAA AGCAAAACAA CGCTAATGGC TTTACCGTAT TAAGTTGCGA TAACTTGCCC CACAACGGCA AAATAACGCA AAACGTTGTA ATGCGTTTTG CAGAAAAGGT AGACGCCGAA TTAGCCAGCT GGATAGCAAC ACACATTAGC TTCTGCAGCA CTATGGTGGA TAGAATTGTA CCCGCAACCA CCAGCGCCGA CTTAGACGAA GTAAAAAATC TTATAGGTCT AGCAGACGAT GCCGCCGTTA TTTGCGAACC ATTTAGGCAG TGGGTAATAG AAGACAATTT TGTGGCGGGT AGACCGCAGT GGGAAGACGC CGGCGCACTA CTTGTTGCCG ATGTAACCCC CTACGAAGAC ATGAAATTAC GCTTACTAAA TGGCAGCCAT TCAGCGCTGG CTTATTTAGG TTTTTTATCT GGCTTCGACT TCATTCATCA AGCCATCGCC AACCCTCGCT TACTGGCGTT AACCAAAAAA CTAATGGATG AAGACGTAAC CCCTACCCTA AATGTACCTT CGGGGTTCGA TTTAGACGCG TATAAAGCAA TTATTCGCAC ACGCTTCGCC AATAGCCGAG TACCCTACAA AACAACGCAA GTAGCAAATG ACGGCTCGCA AAAACTGCCA CAACGTATTC TTGCAGTTGC GGATCACTTA ATATCAGGTG GCAAACAGCC CGCTGTAATT CCAGCCATTA TCGCCGCATG GTTTCAGTTT TTAGAGGGCC AAGATACTCA TGGCGAGCAA CATACGGTTA ACGACCCGCT AGCAAACACA CTTTGCCCTC TTGCGCTTAA GCACAAGGCT AACGACACCA AACAGGTACA AGAGCTAGTT GCAGCAAGTC AAATATTCCC AGAAGGCTTA ATAGCGAATA CTGAGTTTAT TAATAGCATT GAACATTATC TTGCTAAATT TCATGCAAAA GGGGTGTTGA CCACACTCGC TGAATTAAAC TAA
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Protein sequence | MSNLHLNYES LSNVLDPVKK PQYTPSEHRS GIVHIGIGAF HKAHQAVFTD DVLNMHGGDW RITAVSLRRP DARDQLEKQN SLYTVVEKSD GEISPRIIGA VEKVLVCPED PQQVINTIAS TDIKIVSLTI TEKGYCQKNG TLDTSNVDIA HDLNNLSAPK SMPGLIVAAC AARKQNNANG FTVLSCDNLP HNGKITQNVV MRFAEKVDAE LASWIATHIS FCSTMVDRIV PATTSADLDE VKNLIGLADD AAVICEPFRQ WVIEDNFVAG RPQWEDAGAL LVADVTPYED MKLRLLNGSH SALAYLGFLS GFDFIHQAIA NPRLLALTKK LMDEDVTPTL NVPSGFDLDA YKAIIRTRFA NSRVPYKTTQ VANDGSQKLP QRILAVADHL ISGGKQPAVI PAIIAAWFQF LEGQDTHGEQ HTVNDPLANT LCPLALKHKA NDTKQVQELV AASQIFPEGL IANTEFINSI EHYLAKFHAK GVLTTLAELN
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