Gene Sde_1265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1265 
Symbol 
ID3965247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1622712 
End bp1623587 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content42% 
IMG OID637920339 
Producthypothetical protein 
Protein accessionYP_526739 
Protein GI90020912 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0000338125 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000790963 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTAAAA AAATAGCGTT TCAAATTATA TTCATCATTA GCACTCTAGT GCTCATATGC 
ACTGCAGCAT ATAGCGAAAC AGAAATAAAA GTTAATGTTG CAAGTGGTGC TAAGGCAGAC
TATGTTATTC AATTAATCGA ACTCGCCTAC CAAAAGCTAG AAAAAAAGGT AACCATAACC
AAAGACGAAA CCCGTATAAC GCAAGGGCGA ATAAACGAAG AGGTCGCCAA TGGCAATTTA
GATGTTATGT GGGTTTCAAC AAGCGTTAAA AAAGAAGAAG ACTTTTTACC CGTACGCACC
CCATTACTCA AAGGGTTACT CGGGTATCGC ATAATGTTTA TACGGCAAGG CGAACAAAGT
AAATTCGACA ACATTCGCAC CCTAGACGAC TTACGATCCA TAAAACTTGG GCAAGGCAGA
ACCTGGGCTG ACACAGCCAT ACTCGAAGCC AACAACATAG ATGTAGTAAA GGCCGCCAAA
AAAGATAATT TATTCAACAT GCTTGATGGC AGCCGCTTCG ATGCGTTCCC CCGTGGAGCC
AGCGAACCAT TTTCTGAAAT ACAACAGTAT TCTCACCTTA ATATAGCGAT AGAAAGCAAC
CTTGTATTAG CCTACAAAAT GCCTTTTTAT ATATTTGTAA ATAAAAACAA CCACGCACTC
GCCGCCGATA TAGAACAAGG CCTAAACCTC GCCATTGCAG ATGGCAGTTT CGATAAAGTG
TTTTATCGCA ACCCAACCGT TATTGACGCT CTAGAGAAAG CTCGCTTGGA TAAGCGACAT
GTCATTGAGT TAGTTAACCC CACACTTCCA ACTAACACCC CAGTTGATAG AAAAGAACTT
TGGCTTTCGC CTGCAGATAC TCGGCCCCAA CCTTAA
 
Protein sequence
MFKKIAFQII FIISTLVLIC TAAYSETEIK VNVASGAKAD YVIQLIELAY QKLEKKVTIT 
KDETRITQGR INEEVANGNL DVMWVSTSVK KEEDFLPVRT PLLKGLLGYR IMFIRQGEQS
KFDNIRTLDD LRSIKLGQGR TWADTAILEA NNIDVVKAAK KDNLFNMLDG SRFDAFPRGA
SEPFSEIQQY SHLNIAIESN LVLAYKMPFY IFVNKNNHAL AADIEQGLNL AIADGSFDKV
FYRNPTVIDA LEKARLDKRH VIELVNPTLP TNTPVDRKEL WLSPADTRPQ P