Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1265 |
Symbol | |
ID | 3965247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1622712 |
End bp | 1623587 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637920339 |
Product | hypothetical protein |
Protein accession | YP_526739 |
Protein GI | 90020912 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0000338125 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000790963 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTAAAA AAATAGCGTT TCAAATTATA TTCATCATTA GCACTCTAGT GCTCATATGC ACTGCAGCAT ATAGCGAAAC AGAAATAAAA GTTAATGTTG CAAGTGGTGC TAAGGCAGAC TATGTTATTC AATTAATCGA ACTCGCCTAC CAAAAGCTAG AAAAAAAGGT AACCATAACC AAAGACGAAA CCCGTATAAC GCAAGGGCGA ATAAACGAAG AGGTCGCCAA TGGCAATTTA GATGTTATGT GGGTTTCAAC AAGCGTTAAA AAAGAAGAAG ACTTTTTACC CGTACGCACC CCATTACTCA AAGGGTTACT CGGGTATCGC ATAATGTTTA TACGGCAAGG CGAACAAAGT AAATTCGACA ACATTCGCAC CCTAGACGAC TTACGATCCA TAAAACTTGG GCAAGGCAGA ACCTGGGCTG ACACAGCCAT ACTCGAAGCC AACAACATAG ATGTAGTAAA GGCCGCCAAA AAAGATAATT TATTCAACAT GCTTGATGGC AGCCGCTTCG ATGCGTTCCC CCGTGGAGCC AGCGAACCAT TTTCTGAAAT ACAACAGTAT TCTCACCTTA ATATAGCGAT AGAAAGCAAC CTTGTATTAG CCTACAAAAT GCCTTTTTAT ATATTTGTAA ATAAAAACAA CCACGCACTC GCCGCCGATA TAGAACAAGG CCTAAACCTC GCCATTGCAG ATGGCAGTTT CGATAAAGTG TTTTATCGCA ACCCAACCGT TATTGACGCT CTAGAGAAAG CTCGCTTGGA TAAGCGACAT GTCATTGAGT TAGTTAACCC CACACTTCCA ACTAACACCC CAGTTGATAG AAAAGAACTT TGGCTTTCGC CTGCAGATAC TCGGCCCCAA CCTTAA
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Protein sequence | MFKKIAFQII FIISTLVLIC TAAYSETEIK VNVASGAKAD YVIQLIELAY QKLEKKVTIT KDETRITQGR INEEVANGNL DVMWVSTSVK KEEDFLPVRT PLLKGLLGYR IMFIRQGEQS KFDNIRTLDD LRSIKLGQGR TWADTAILEA NNIDVVKAAK KDNLFNMLDG SRFDAFPRGA SEPFSEIQQY SHLNIAIESN LVLAYKMPFY IFVNKNNHAL AADIEQGLNL AIADGSFDKV FYRNPTVIDA LEKARLDKRH VIELVNPTLP TNTPVDRKEL WLSPADTRPQ P
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