| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1256 |
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| Symbol | |
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| ID | 3965238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1606793 |
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| End bp | 1609456 |
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| Gene Length | 2664 bp |
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| Protein Length | 887 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920330 |
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| Product | DNA mismatch repair protein MutS |
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| Protein accession | YP_526730 |
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| Protein GI | 90020903 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | [TIGR01070] DNA mismatch repair protein MutS |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.280018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00178613 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAGTA CATCTACCGC TACGCCCATT GCTAACGAAA ACCACACCCC TATGATGCAG
CAATACCTGC GCATTAAGGC AGAGCACCCC AATGAGATTG TGTTTTACCG TATGGGGGAT
TTTTATGAGT TGTTTTTCGA TGATGCAAAA AAAGCGGCGA AGCTATTAGA TGTAACCCTT
ACCGCACGCG GTAAATCCAA CGGCGAGCCT ATTCCTATGG CGGGCGTGCC CTACCACGCA
GCCGAAAACT ATTTGGCTAA GCTTGTGCGT TTGGGGGTTT CAGTTGCCAT TGTAGAGCAG
GTAGGTGACC CAGCTACCAC CAAAGGGCCG GTAGAGCGCA AAGTTATGCG CATTGTTACC
CCAGGCACGG TTAGTGATGA AGCGCTGCTA GATGAAACTC GCGATAACCT TTTGGTGGCT
ATCACCTTAA AAGATGAGCG CTATGGCATT AGCTCTTTAG ATATGGGCAG TGGCCGCTTT
ACCGTATTTG AAGTTGCCGA CGAAGAGGCA TTAATAGGCG AAATTGAGCG CTTACAGCCA
GCCGAATTGC TTGCCCCAGA ATTGCTTACC GTACCTAATA TTATAAGCTT GCGTGCAGGC
TATAGACGCC GCCCAGATTG GGAGTTTGAA TACGATACAG CCCAGCGCTT GCTCACCCGC
CATTTTGGCA CGCAAGATTT AAGCGGTTTT GGTTGCGAAG ACTTTACCGC AGGTATTAGC
GCCGCGGGGT GCTTATTTGC ATATGCACAA GAAACCCAAA AAACGACGCT AAGCCACGTT
GCCAAATTAG TATTGGATAA CCCAGAAACC AAAGTAACAC TGGATGCAGC AACACGCCGT
AACTTAGAGT TAGACACTAA CCTAGCCGGC ACAGAAGACA ACACATTATT TAGCGTGTTA
AATACTACCA CCACAGCAAT GGGTGGGCGC TTATTGCGCC GCTGGTTACA TTCACCACTG
CGCGATATTT ACATACTTAA CCAGCGCCAA AGCGCTATAG AAGCGCTGTT AGATAATTAT
CAATTTGAAC CGCTACGTCA CACCTTAAAA CACATTAGTG ACTTAGAACG TATTTTGGGC
CGCTTGGCTT TGCGCTCTGC TCGGCCGCGC GACTTGTCGC GTTTATGTGC ATCTATTGCG
GAGTTTCCCG CAATTCAACA GCATTTAAAC GGTATTGATA GCCCGCTACT AAAAAAACTA
GCAAAAGAAA TTCGAGAATT CCCAGACCTA GTTGATTTGC TTAGCCGTGC CTTAATGGAA
AACCCACCGG TAGTTATTCG CGAAGGCGGG GTTATTGCAG AAGGGTTCGA TGAAGAGCTA
GACGAGCTGC GCGCAATTAG TACAAATGCC GGTGATTATT TAATTAAGTT AGAAGAACAA
GAGCGTGCTA AAACCGGTCT TTCTACGCTT AAAGTGGGCT ACAACCGCGT ACACGGTTAC
TACATTGAAA TTAGTAAATC GCAAGCTAGC TCGGCGCCAA CAGAATATAT TCGCAGGCAA
ACACTTAAAA ATGCCGAGCG TTTTATTACG CCAGAATTAA AAACTTTTGA AGATAAAGCC
TTGTCTGCAA AAAGCCGTGC GCTCGCGCGT GAAAAAGGCT TGTACGATGA TCTTATCGAA
ACCCTCAACG AGCAATTGCG CGAACTACAA GTTGCGGCTT CTGGCGTTGC CGAGCTAGAT
GTATTAACCA CATTAGCCGA GCGTTCAAAC CTATTAAACT TTTGCAAGCC AGAGCTGTAC
GAAGGCGAAG GCATTTTTAT CGAACAAGGT CGCCACCCTG TGGTTGAACA GGTGTTAGAT
GACCCGTTCG TACCTAACGA CTTACTACTA GATACCGACC AACGGATGCT AATCATTACC
GGCCCCAACA TGGGCGGTAA GTCGACTTAC ATGCGACAAA CAGCGCTTAT TGTGCTGCTG
GCGCAAATTG GCTGCTACGT ACCGGCCAGC GCTTGCAAGC TGGGCTTGGT AGATCGCATA
TTTACTCGTA TTGGCTCATC AGACGATTTG GCAGGCGGCC GCTCTACTTT TATGGTGGAA
ATGACCGAAA CCGCCAATAT TCTAAACAAC GCTACCCGCA ACAGCCTTGT GCTTATGGAT
GAGATTGGTC GCGGTACCAG TACCTACGAC GGCCTGTCGC TGGCGTGGGC ATGCGTGGAA
CATCTCGCTA ACAACTTGCA CGCATTTACC CTGTTCGCCA CCCATTACTT TGAGCTAACC
GGCTTGCCGA AAGCATTAGC TGGCGTGCAA AACGTACATT TGGATGCAAC CGAGCACAAC
GACTCGATTG TTTTTCTTCA CAAAATACAA CCCGGCCCTG CCAGCAAGAG CTTTGGTTTG
CAGGTGGCAA AACTAGCTGG TATTCCTTCC AACGTGATTG CCGACGCGGG CGGTCACTTG
CGCAGGTTAG AGGCCCAGCC GACGGTAGAC ACGCCGCACC AATTCCCGGC CCCCGAGCCT
ATTGCCTTGC AAGAGCCGGT TGCGGAACCA GAACCCAACA AACCAGCTGC TGCTGCCAAA
ACCAAACCGG CTAGCCCGCA ACCCGATTTG TTTGCGAGCG CGGCCCCTTC GGCTGTGGAA
ATAAAACTGA GAAGCATTAA CCCCGATAAT TTAACCCCGA GACAAGCTTT ACAGGCCTTA
TACGATTTAA AAGATATAAG TTAG
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| Protein sequence | MNSTSTATPI ANENHTPMMQ QYLRIKAEHP NEIVFYRMGD FYELFFDDAK KAAKLLDVTL
TARGKSNGEP IPMAGVPYHA AENYLAKLVR LGVSVAIVEQ VGDPATTKGP VERKVMRIVT
PGTVSDEALL DETRDNLLVA ITLKDERYGI SSLDMGSGRF TVFEVADEEA LIGEIERLQP
AELLAPELLT VPNIISLRAG YRRRPDWEFE YDTAQRLLTR HFGTQDLSGF GCEDFTAGIS
AAGCLFAYAQ ETQKTTLSHV AKLVLDNPET KVTLDAATRR NLELDTNLAG TEDNTLFSVL
NTTTTAMGGR LLRRWLHSPL RDIYILNQRQ SAIEALLDNY QFEPLRHTLK HISDLERILG
RLALRSARPR DLSRLCASIA EFPAIQQHLN GIDSPLLKKL AKEIREFPDL VDLLSRALME
NPPVVIREGG VIAEGFDEEL DELRAISTNA GDYLIKLEEQ ERAKTGLSTL KVGYNRVHGY
YIEISKSQAS SAPTEYIRRQ TLKNAERFIT PELKTFEDKA LSAKSRALAR EKGLYDDLIE
TLNEQLRELQ VAASGVAELD VLTTLAERSN LLNFCKPELY EGEGIFIEQG RHPVVEQVLD
DPFVPNDLLL DTDQRMLIIT GPNMGGKSTY MRQTALIVLL AQIGCYVPAS ACKLGLVDRI
FTRIGSSDDL AGGRSTFMVE MTETANILNN ATRNSLVLMD EIGRGTSTYD GLSLAWACVE
HLANNLHAFT LFATHYFELT GLPKALAGVQ NVHLDATEHN DSIVFLHKIQ PGPASKSFGL
QVAKLAGIPS NVIADAGGHL RRLEAQPTVD TPHQFPAPEP IALQEPVAEP EPNKPAAAAK
TKPASPQPDL FASAAPSAVE IKLRSINPDN LTPRQALQAL YDLKDIS
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