| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1250 |
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| Symbol | |
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| ID | 3968211 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1600482 |
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| End bp | 1601153 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637920324 |
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| Product | protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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| Protein accession | YP_526724 |
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| Protein GI | 90020897 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2518] Protein-L-isoaspartate carboxylmethyltransferase |
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| TIGRFAM ID | [TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.424545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGATCGAT TAAAACTAGA AGGCGTGGGG ATGACCTCTA AACGCACTCG TGACCGTTTG
GTCGAGCGTT TGCTCGAGCA AGGGGTAACT AGTCAGTTTG TGTTGGAGTT AATAGCCAAT
ACGCCACGGC ATTTATTCTT AGATGAAGCG CTTTCCCACC GCGCTTATGA AGATGCGTCC
CTCCCTATAG GCTTCGGCCA AACCCTTTCC CAGCCCTACA TTGTTGCCCG AATGACCGAA
ATATTGCTCG GTGCCGCTGG CGACCCCAAG CGCGTGCTCG AAATAGGCAC TGGCTCTGGC
TACCAAACCT GCATTTTGGC GCAAGCCGTT GAACATGTGT GGAGCGTGGA ACGAATTAAG
CCATTGCAGG ACAAAGCAAA ACAGCGCTTA AGGCACCTAG GGCTAAATAA TGTCACCTAT
AAGCACGCGG ATGGCGGCTT CGGTTGGCCC GAGCAGGGGC CCTTCGATGC AATTCTTTCT
GCCGCGGCAC CTCGCGATAT TCCTAAAAGT CTGCTACAGC AATTGGCGCA CAATGGCGTG
CTGGTTATCC CCGTGGGTGC TGATGAGCAG GTGCTTACCC TAGTGATAAG GGATGGCGAA
GAAGACAAAT TCATAACCCA AAAATTAGAA CCTGTTAAGT TTGTACCACT ACTATCTGGA
GTAACACGTT AA
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| Protein sequence | MDRLKLEGVG MTSKRTRDRL VERLLEQGVT SQFVLELIAN TPRHLFLDEA LSHRAYEDAS
LPIGFGQTLS QPYIVARMTE ILLGAAGDPK RVLEIGTGSG YQTCILAQAV EHVWSVERIK
PLQDKAKQRL RHLGLNNVTY KHADGGFGWP EQGPFDAILS AAAPRDIPKS LLQQLAHNGV
LVIPVGADEQ VLTLVIRDGE EDKFITQKLE PVKFVPLLSG VTR
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