Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1218 |
Symbol | |
ID | 3968003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1565787 |
End bp | 1566443 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637920292 |
Product | uracil-DNA glycosylase |
Protein accession | YP_526692 |
Protein GI | 90020865 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.145482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCAAA TAGGGCAAGA GTTTGAGCAG CCCTACATGG CAGAGTTAAA AGCATTTTTG CTTCGCGAAA AAAAAGCAGG TAAAACTATT TACCCCGCAG GCGAAAACAT TTTTAACGCA CTAAATACCA CGCCTTTTGA GCACGTAAAA GTAGTAATTC TCGGGCAAGA CCCGTACCAC GGCCCTGGCC AAGCCCACGG GCTGTGTTTT TCTGTATTGC CAGGCGTGCG CTTTCCGCCG TCGCTTCTGA ATATTTTCAA AGAAATTCAC AACGATTTGG GGTTTGATAT TCCAAGCCAC GGTTGTTTGC AGTCCTGGGC TGAGCAGGGG GTGTTACTGT TAAATGCCAC CTTGACTGTC GAGCAGGCCA AAGCTGGGTC GCATCAGGGT AAGGGGTGGG AAACTTTTAC CGACGCAGTT ATAGGGGCTT TGAATAATCA TCGCGAAGGT ATCGTTTTTT TATTGTGGGG TAGCTATGCA CATAAAAAAG GTAACATTAT CGATACCACA CGGCACCATG TACTTAAATC TGTGCACCCA TCACCGCTTT CTGCGCACCG TGGTTTTTTT GGTAATAGCC ACTTTTCGCA AGCGAATAAA TTTTTAGCAC AGCAAGGTCT CACCGAAATA GATTGGCGTG TGCCCCCAAG TGAGTAA
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Protein sequence | MQQIGQEFEQ PYMAELKAFL LREKKAGKTI YPAGENIFNA LNTTPFEHVK VVILGQDPYH GPGQAHGLCF SVLPGVRFPP SLLNIFKEIH NDLGFDIPSH GCLQSWAEQG VLLLNATLTV EQAKAGSHQG KGWETFTDAV IGALNNHREG IVFLLWGSYA HKKGNIIDTT RHHVLKSVHP SPLSAHRGFF GNSHFSQANK FLAQQGLTEI DWRVPPSE
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