| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1216 |
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| Symbol | |
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| ID | 3968001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1563056 |
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| End bp | 1564099 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637920290 |
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| Product | peptide chain release factor 2 |
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| Protein accession | YP_526690 |
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| Protein GI | 90020863 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1186] Protein chain release factor B |
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| TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0000777998 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCTTAG GGGGTATCTT TGAATACGCT GAAAAGAAAG AGCGCTTAGC CGAAGTAGAG
CTAGAGCTAG CAGAGCCCGA TGTATGGGAT GATCCTGCCC GCGCGCAAGC GCTAGGCAGT
GAACGCAGCT CGCTCGAGCT GGTAGTAGAA ACTATCGAAA CCCTCGAAAA CGGCGTTGCC
GATTGCCGCG AGCTGCTCGA AATGGCAATT GAAGAGAGCG ACGAAGATAG CTTTCTAGAA
ATTTGCAGCG AAGCAGACCG CTTAGAAGCC CATTTGGCTA CGCTAGAGTT CCGCCGTATG
TTCTCTGGCG AAATGGACCC GAATAACGCC TACCTCGATA TTCAAGCCGG TTCGGGTGGT
ACAGAGGCGC AGGACTGGGC CGAGATGCTA TTGCGTATGT ATTTGCGCTG GGGTGAAGAC
AAGGGCTTTA AGACGACGCT TGAAGAAGCA TCGGCAGGTG ATGTGGCGGG TATTAAAAGT
GCCACTATTC GCTTTGAAGG GGAATACGCC TTTGGCTGGC TGCGCACTGA AACGGGCGTG
CATCGATTAG TGCGTAAATC ACCGTTCGAC TCTGGCAATC GTCGTCACAC TTCTTTTTCT
TCTGTATTCG TGTCGCCAGA AATTGACGAC AATATCGATA TAGAAATAAA CAAAGCCGAT
GTGCGAGAAG ATACTTACCG CGCGTCGGGT GCGGGTGGTC AGCACGTTAA CAAAACCGAT
TCGGCTGTGC GCTTAACTCA CGCGCCAACG GGAATAGTTG TGCAGTGCCA AAGCGAACGT
TCGCAGCACT CTAACCGCGA TAAAGCATGG AAAATGCTCC GCGCTAGGGT TTACGAGCAA
GAGATGCAAA AGCGCAATGC AGAAAAGCAG GCGTTAGAAG ACAGTAAATC TGATATTGGT
TGGGGCAGTC AAATTCGATC TTACGTATTG GATGACCAGC GCATTAAAGA TTTGCGTACC
AATGTTCAAA CCAGTAACTG CAATGCCGTG CTTGATGGCA AGCTTGACGA TTTTATTGTC
GCGAGTTTAA AAGCGGGCTT ATAA
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| Protein sequence | MCLGGIFEYA EKKERLAEVE LELAEPDVWD DPARAQALGS ERSSLELVVE TIETLENGVA
DCRELLEMAI EESDEDSFLE ICSEADRLEA HLATLEFRRM FSGEMDPNNA YLDIQAGSGG
TEAQDWAEML LRMYLRWGED KGFKTTLEEA SAGDVAGIKS ATIRFEGEYA FGWLRTETGV
HRLVRKSPFD SGNRRHTSFS SVFVSPEIDD NIDIEINKAD VREDTYRASG AGGQHVNKTD
SAVRLTHAPT GIVVQCQSER SQHSNRDKAW KMLRARVYEQ EMQKRNAEKQ ALEDSKSDIG
WGSQIRSYVL DDQRIKDLRT NVQTSNCNAV LDGKLDDFIV ASLKAGL
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