| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1203 |
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| Symbol | rpsP |
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| ID | 3967872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1548771 |
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| End bp | 1549019 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637920277 |
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| Product | 30S ribosomal protein S16 |
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| Protein accession | YP_526677 |
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| Protein GI | 90020850 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0228] Ribosomal protein S16 |
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| TIGRFAM ID | [TIGR00002] ribosomal protein S16 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.00503973 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTAAGCA TTCGATTGTC TCGTGGTGGC TCTAAAAAGC GCCCATTTTA TCATTTGACC
GTAACTGACA GCCGTAAATC ACGTGACGGC CGTTTCATTG AGCGTGTTGG TTTCTTCAAC
CCAGTAGCAC GTGGTCAAGA AGAGCGTCTA CGTGTTGAGA GCGAGCGTTT GAACTACTGG
TTGAGCCAAG GCGCACAGTG TTCAGAGCGT GTAGCTAAGT TAATCAAAGA TGCAGCTGCT
GCGGCTTAA
|
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| Protein sequence | MVSIRLSRGG SKKRPFYHLT VTDSRKSRDG RFIERVGFFN PVARGQEERL RVESERLNYW
LSQGAQCSER VAKLIKDAAA AA
|
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