Gene Sde_1200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1200 
Symbol 
ID3967869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1544697 
End bp1545977 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content46% 
IMG OID637920274 
Productmetal dependent phosphohydrolase 
Protein accessionYP_526674 
Protein GI90020847 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4536] Putative Mg2+ and Co2+ transporter CorB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGCCG TTTCGACACA ATTACTTGTA GTTATTTTAG TTGGGTTAAT CATTTGCTCT 
GCTTTTTTTT CTAGTTCAGA AACGGGCATG CTATCGCTCA ACCGATACCG CCTGCGCCAC
CTAGTAAAAA AAGAGCATAA AGGCGCAACC CTAGCATCTA ACCTACTTGC CCGCCCTGAG
CGCCTAATAG GCGTTATTCT TATTGGCAAC AACCTTGTAA ATATTCTTAT TGCAATGGTT
GGCACCGCAA TTGCCGAACG CTACCTAAGC GAATGGGCAG TTATTGTTGT AGCCCCCATA
GCCCTTACGC TTATTCTATT GGTTTTTGCG GAAGTCACCC CCAAGTCAAT TGCAGCAATT
TTCCCCGAGC GAATTGCATT TCCGGCCAGT TACGTGCTTC AGCCGCTGCT GCTGCTACTT
TACCCGTTTG TACTTGTGGT TAACGCAATA TCCAATGGCT TGGCGCGCCT AGCCGGTATA
GACCTAGCAA AAGCCAAACT TTCTGATCAC TTGCGGCCAG AAGAATTAAG AACCGTTGTG
GATGAAGCCG GTGAACTTAT TCCCGACCAC CACCAAGGTA TGCTGTTAAA TGTATTAGAC
CTAGAAAAAG CCACCGTGGA AGACATTATG ATTCCGCGCA ATGAAGTTAT TGGCATTGAT
CTAGACGACG ATATTGAAGA TATCATGGAG TTGATTCGCT CCACCGAATA TACGCGCTTG
CCTGTATTTG AGGGCGACAT AAACAATGTG GTTGGCGTAT TGCACTTGCG CAATGCAGCG
CGATTTATTC AAGGCGACAA CTCAACCGTT ACTCACGATT CCATTCGCGA GCATTGCAGC
GAGCCGTATT TTATCCCCGA ATCTACCCCG CTGCCCACGC AGCTAATGAA CTTTCAACAA
CAAAAGCGAC GCACCGCTAT TGTGGTAGAT GAATATGGCG AGGTACAAGG CATAGCCACG
CTGGTGGATT TGCTTGAAGA AATTGTAGGC GATTTTAGTA CCGATACTGC AGAAGATAGC
GAACCGGATA TTACCGAATG TGAAGATGAC TGGTTTTTAA TTGACGGCTC TACGTCTATT
CGCGACATTA ATCGTCAATT AGGCTGGACT CTATCCACCG ATGGCCCCAA AACGCTCAAC
GGCATTATTG TTGAGTACCT AGAAAGTATT CCCGATGCAT TAGTAAGCTT TGAGGTGGGC
AATTATCGCT TTGAGATTGT CGAGCTTACA GAAACACGAA TAGAAAAAGC AAAAGTACTC
GAAATTAGCC TTCAAGCTTA G
 
Protein sequence
MDAVSTQLLV VILVGLIICS AFFSSSETGM LSLNRYRLRH LVKKEHKGAT LASNLLARPE 
RLIGVILIGN NLVNILIAMV GTAIAERYLS EWAVIVVAPI ALTLILLVFA EVTPKSIAAI
FPERIAFPAS YVLQPLLLLL YPFVLVVNAI SNGLARLAGI DLAKAKLSDH LRPEELRTVV
DEAGELIPDH HQGMLLNVLD LEKATVEDIM IPRNEVIGID LDDDIEDIME LIRSTEYTRL
PVFEGDINNV VGVLHLRNAA RFIQGDNSTV THDSIREHCS EPYFIPESTP LPTQLMNFQQ
QKRRTAIVVD EYGEVQGIAT LVDLLEEIVG DFSTDTAEDS EPDITECEDD WFLIDGSTSI
RDINRQLGWT LSTDGPKTLN GIIVEYLESI PDALVSFEVG NYRFEIVELT ETRIEKAKVL
EISLQA