Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1200 |
Symbol | |
ID | 3967869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | - |
Start bp | 1544697 |
End bp | 1545977 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637920274 |
Product | metal dependent phosphohydrolase |
Protein accession | YP_526674 |
Protein GI | 90020847 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4536] Putative Mg2+ and Co2+ transporter CorB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACGCCG TTTCGACACA ATTACTTGTA GTTATTTTAG TTGGGTTAAT CATTTGCTCT GCTTTTTTTT CTAGTTCAGA AACGGGCATG CTATCGCTCA ACCGATACCG CCTGCGCCAC CTAGTAAAAA AAGAGCATAA AGGCGCAACC CTAGCATCTA ACCTACTTGC CCGCCCTGAG CGCCTAATAG GCGTTATTCT TATTGGCAAC AACCTTGTAA ATATTCTTAT TGCAATGGTT GGCACCGCAA TTGCCGAACG CTACCTAAGC GAATGGGCAG TTATTGTTGT AGCCCCCATA GCCCTTACGC TTATTCTATT GGTTTTTGCG GAAGTCACCC CCAAGTCAAT TGCAGCAATT TTCCCCGAGC GAATTGCATT TCCGGCCAGT TACGTGCTTC AGCCGCTGCT GCTGCTACTT TACCCGTTTG TACTTGTGGT TAACGCAATA TCCAATGGCT TGGCGCGCCT AGCCGGTATA GACCTAGCAA AAGCCAAACT TTCTGATCAC TTGCGGCCAG AAGAATTAAG AACCGTTGTG GATGAAGCCG GTGAACTTAT TCCCGACCAC CACCAAGGTA TGCTGTTAAA TGTATTAGAC CTAGAAAAAG CCACCGTGGA AGACATTATG ATTCCGCGCA ATGAAGTTAT TGGCATTGAT CTAGACGACG ATATTGAAGA TATCATGGAG TTGATTCGCT CCACCGAATA TACGCGCTTG CCTGTATTTG AGGGCGACAT AAACAATGTG GTTGGCGTAT TGCACTTGCG CAATGCAGCG CGATTTATTC AAGGCGACAA CTCAACCGTT ACTCACGATT CCATTCGCGA GCATTGCAGC GAGCCGTATT TTATCCCCGA ATCTACCCCG CTGCCCACGC AGCTAATGAA CTTTCAACAA CAAAAGCGAC GCACCGCTAT TGTGGTAGAT GAATATGGCG AGGTACAAGG CATAGCCACG CTGGTGGATT TGCTTGAAGA AATTGTAGGC GATTTTAGTA CCGATACTGC AGAAGATAGC GAACCGGATA TTACCGAATG TGAAGATGAC TGGTTTTTAA TTGACGGCTC TACGTCTATT CGCGACATTA ATCGTCAATT AGGCTGGACT CTATCCACCG ATGGCCCCAA AACGCTCAAC GGCATTATTG TTGAGTACCT AGAAAGTATT CCCGATGCAT TAGTAAGCTT TGAGGTGGGC AATTATCGCT TTGAGATTGT CGAGCTTACA GAAACACGAA TAGAAAAAGC AAAAGTACTC GAAATTAGCC TTCAAGCTTA G
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Protein sequence | MDAVSTQLLV VILVGLIICS AFFSSSETGM LSLNRYRLRH LVKKEHKGAT LASNLLARPE RLIGVILIGN NLVNILIAMV GTAIAERYLS EWAVIVVAPI ALTLILLVFA EVTPKSIAAI FPERIAFPAS YVLQPLLLLL YPFVLVVNAI SNGLARLAGI DLAKAKLSDH LRPEELRTVV DEAGELIPDH HQGMLLNVLD LEKATVEDIM IPRNEVIGID LDDDIEDIME LIRSTEYTRL PVFEGDINNV VGVLHLRNAA RFIQGDNSTV THDSIREHCS EPYFIPESTP LPTQLMNFQQ QKRRTAIVVD EYGEVQGIAT LVDLLEEIVG DFSTDTAEDS EPDITECEDD WFLIDGSTSI RDINRQLGWT LSTDGPKTLN GIIVEYLESI PDALVSFEVG NYRFEIVELT ETRIEKAKVL EISLQA
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