Gene Sde_1199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1199 
Symbol 
ID3967868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1544157 
End bp1544693 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content55% 
IMG OID637920273 
ProductNUDIX hydrolase 
Protein accessionYP_526673 
Protein GI90020846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGTG AATTGATCAA TCAGGCGGCG GTCATGGTGC TGTTGTCAGA GGGGCCCGGG 
GGTGAGAGGG TATTGCTTAC CCGTCGTGCC GAACACCTCA ATCAGCATGC GGGCGAAATA
GCGTTGCCTG GCGGCAAATG GGAGCCGGCC GACCCAGATT TACTTACCAC TGCCTTGCGT
GAAACCCATG AAGAGGTGGG GATTCCGCCT TGGAAGGTGG AGGTGCTGGG AACTTTACCC
GCGGCTTATA CGCGCAGGGG AGTGAAGGTG ACGCCGTATA TTGGCCGGGT AGCTCACGAC
GTAGAATTGG TCGCCAACCT CGAAGAGTTG GATGAGATGT TTTGGATTCC CATCGAGTTC
TTAAAGCAAG ATAAGCGCAA GCGCACCGAT CGATATCAGC ATTTAGGCCA AGTGTTTTGG
GCGCCAGCTT ATGTGTACGA ACAGCATTTG GTGTGGGGGT TTACGGCAAG GGTTTTGGTG
GAGTTGCTGC GAGTGCATTA TGGTGTGGTG CTGCAGGCAC CGGAAGGTGC CTGTTAA
 
Protein sequence
MGSELINQAA VMVLLSEGPG GERVLLTRRA EHLNQHAGEI ALPGGKWEPA DPDLLTTALR 
ETHEEVGIPP WKVEVLGTLP AAYTRRGVKV TPYIGRVAHD VELVANLEEL DEMFWIPIEF
LKQDKRKRTD RYQHLGQVFW APAYVYEQHL VWGFTARVLV ELLRVHYGVV LQAPEGAC