Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sde_1199 |
Symbol | |
ID | 3967868 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Saccharophagus degradans 2-40 |
Kingdom | Bacteria |
Replicon accession | NC_007912 |
Strand | + |
Start bp | 1544157 |
End bp | 1544693 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637920273 |
Product | NUDIX hydrolase |
Protein accession | YP_526673 |
Protein GI | 90020846 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAGTG AATTGATCAA TCAGGCGGCG GTCATGGTGC TGTTGTCAGA GGGGCCCGGG GGTGAGAGGG TATTGCTTAC CCGTCGTGCC GAACACCTCA ATCAGCATGC GGGCGAAATA GCGTTGCCTG GCGGCAAATG GGAGCCGGCC GACCCAGATT TACTTACCAC TGCCTTGCGT GAAACCCATG AAGAGGTGGG GATTCCGCCT TGGAAGGTGG AGGTGCTGGG AACTTTACCC GCGGCTTATA CGCGCAGGGG AGTGAAGGTG ACGCCGTATA TTGGCCGGGT AGCTCACGAC GTAGAATTGG TCGCCAACCT CGAAGAGTTG GATGAGATGT TTTGGATTCC CATCGAGTTC TTAAAGCAAG ATAAGCGCAA GCGCACCGAT CGATATCAGC ATTTAGGCCA AGTGTTTTGG GCGCCAGCTT ATGTGTACGA ACAGCATTTG GTGTGGGGGT TTACGGCAAG GGTTTTGGTG GAGTTGCTGC GAGTGCATTA TGGTGTGGTG CTGCAGGCAC CGGAAGGTGC CTGTTAA
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Protein sequence | MGSELINQAA VMVLLSEGPG GERVLLTRRA EHLNQHAGEI ALPGGKWEPA DPDLLTTALR ETHEEVGIPP WKVEVLGTLP AAYTRRGVKV TPYIGRVAHD VELVANLEEL DEMFWIPIEF LKQDKRKRTD RYQHLGQVFW APAYVYEQHL VWGFTARVLV ELLRVHYGVV LQAPEGAC
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