| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1197 |
|---|
| Symbol | |
|---|
| ID | 3967866 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 1543278 |
|---|
| End bp | 1543595 |
|---|
| Gene Length | 318 bp |
|---|
| Protein Length | 105 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 637920271 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_526671 |
|---|
| Protein GI | 90020844 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3323] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCAAGC TAGTTTTTTT TGTCCCAGAG AGCCATGTAG AGGCAGTAAA AGCTGCAGTA
TTTGAGGCGG GAGCTGGCAA GCTGGGCGAT TACGATAGCT GTGCGTGGCA AGTGTTGGGG
CAAGGCCAGT TTCGCCCGTT AAGCGGCAGC AACCCATTTA TTGGTGAGCA AGGGCAAATT
GAGCGAGTAC CAGAATACCG GGTAGAGATG GTGTGTGAAG AAGCTGCGCT AGAGGGAGCG
CTTGGTGCAC TATTGCGAGC CCACCCCTAC GAGGAGCCCG CTTACGATGT AATCCAGCTT
GTGCAGCTTA AACGCTAA
|
|---|
| Protein sequence | MFKLVFFVPE SHVEAVKAAV FEAGAGKLGD YDSCAWQVLG QGQFRPLSGS NPFIGEQGQI
ERVPEYRVEM VCEEAALEGA LGALLRAHPY EEPAYDVIQL VQLKR
|
|---|
| |