| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1190 |
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| Symbol | |
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| ID | 3968629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1535350 |
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| End bp | 1536624 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637920264 |
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| Product | diaminobutyrate--2-oxoglutarate aminotransferase |
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| Protein accession | YP_526664 |
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| Protein GI | 90020837 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00709] 2,4-diaminobutyrate 4-transaminases
[TIGR02407] diaminobutyrate--2-oxoglutarate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.528743 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACA TATTTAAAGA TTTAGAATCA AACGTACAAA GTTATGCGCT GTCTTTCCCA
GTGATTTTTA ACCGCGCTAA AAACGAAGAG TTATTCGACA CAGAGGGTAA CGCTTATATC
GACTTTTTAG CAGGTGCAGG TTCTTTGAAC TACGGCCATA ACAACGATGT TATTAAAAAA
GCATTAGTCG AATACATTAT GGAAGATGGT GTTACCCACG GCTTAGATAT GCATACCAAA
GCTAAAGCGG AATTTATGGA TTCGTTTAAC ACCCATATTT TGCAGCCGCG TGAGCTAGAT
TACACCATGC AGTTCACTGG GCCTACAGGC GCGAATGCGG TAGAGGCTGC TTTAAAACTC
GCACGCAAAG TAAAAGGGCG CACAAACGTT GTTTCTTTTA CTAACGGCTT CCACGGTGTA
ACAGCAGGCG CTGTTGCTGC TACAGGTAAC CAGCATCATC GCGATGGAAC CGGGGTGCCT
TTAGCTAACG TTTCGCGTAT GCCGTTTTGC GGTTACCACG GTCAAAATGT AGACACTATT
AAAATGATCG ACAAATTAAT TGGTGATCCA TCTAGTGGTG TTGATGCACC TGCTGCTGCC
ATTGTAGAAG TTGTACAGGG CGAAGGTGGT TTAAACGTTG CGCAAGATGA ATGGTTACGC
CAATTAGAAA AGTTGTGTCG CAAGCACGAC ATGCTGTTAA TTGTGGATGA TATTCAAGCT
GGCTGTGGCC GCACCGGTAC TTTCTTCAGT TTTGAAAAAG CGGGTATTAA GCCAGATATC
ATTACTCTTT CTAAATCTTT CAGTGGCTAC GGCTTGCCAA TGGCCGTTGT GTTGATGTCG
CCAGAGCTCG ATATTTGGAA GCCAGGCGAG CACAACGGAA CCTTCCGCGG TAACAACCAC
GCATTCGTAA CAGCCAAAGC CGCAATTGAG CATTACTGGA AAGATGATAA ATTCCAAAAC
GAAATTGCCG AAAAATCTGC GAAAGTAACC AAGCGCTTAA AGCATATTGC AGATAAATAC
GGTGTAACAA AGGCGCGCTT GAAAGGGCGT GGTTTAATGC AAGGTATTGA TGTTGTTAGT
GGCGAAATTG CCGATGAGAT TACTACTAAA GCATTCGAAA AAGGCTTAAT TATTGAAACC
GCCGGTAACT TGAGTCAGGT AATCAAAGTG TTCTGCCCAT TAACTATTAC TATGGAAAAA
CTTAACGCAG GCTTGGATAT TGTGGAGTCG GCTTTTGCCG AAGTGCTTGG CGACAAATTG
CGTAATGTAT CGTAA
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| Protein sequence | MENIFKDLES NVQSYALSFP VIFNRAKNEE LFDTEGNAYI DFLAGAGSLN YGHNNDVIKK
ALVEYIMEDG VTHGLDMHTK AKAEFMDSFN THILQPRELD YTMQFTGPTG ANAVEAALKL
ARKVKGRTNV VSFTNGFHGV TAGAVAATGN QHHRDGTGVP LANVSRMPFC GYHGQNVDTI
KMIDKLIGDP SSGVDAPAAA IVEVVQGEGG LNVAQDEWLR QLEKLCRKHD MLLIVDDIQA
GCGRTGTFFS FEKAGIKPDI ITLSKSFSGY GLPMAVVLMS PELDIWKPGE HNGTFRGNNH
AFVTAKAAIE HYWKDDKFQN EIAEKSAKVT KRLKHIADKY GVTKARLKGR GLMQGIDVVS
GEIADEITTK AFEKGLIIET AGNLSQVIKV FCPLTITMEK LNAGLDIVES AFAEVLGDKL
RNVS
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