| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1170 |
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| Symbol | |
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| ID | 3968435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | + |
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| Start bp | 1505235 |
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| End bp | 1506191 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637920243 |
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| Product | ribosomal protein S16 |
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| Protein accession | YP_526644 |
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| Protein GI | 90020817 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.36106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000135751 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACACATT CAAATGCAGT AAATACTGCG GCCCTCGAAA TTCGCGGGTT GAAAAAAATC
TACGACAATA AGTTCGAAGC ATTGAAAGGC GTGGACCTAA CTGTAGCCGA AGGCGATTTT
TTCGCACTGC TGGGCCCCAA TGGCGCGGGT AAATCTACCA CTATAGGTAT TATTTGCTCA
CTGGTAAAAA AGTCTGGCGG CAGCGTGAAG GTGTTTGGTG TAGATATAGA TAAAGACTTC
TCTAAAGCCA AGCAATTTAT TGGCGTGGTG CCGCAAGAGT TTAATTTTAA TATGTTTGAA
AAGGTGCAGG ATATTGTTAC CAATCAGGCA GGTTATTACG GCTTACCCTA CAAAGTTGCG
GTAGAGCGGG CGGAAAAATA TCTTAAAAAA TTAGGCCTGT GGGAAAAGCG TTCCACACCT
TCGCGCGGCC TTTCTGGCGG TATGAAGCGG CGCTTAATGA TTGCCCGCGC ACTGGTACAT
GAGCCCAAAC TGCTAATTTT AGATGAGCCA ACAGCGGGGG TAGATATCGA GTTGCGCCGC
TCTATGTGGG AATTTTTGCA AGAAATTAAT GCGGCCGGTA CAACAATTAT TCTTACTACC
CACTACTTAG AAGAGGCGGA AAGCCTGTGC AGAAATGTGG CAATTATCGA TAAGGGTGAA
TTAGTAGAAA ACACCAGTGT AAAAAGTTTA CTTAAGCAGC TAAACAAAGA AGTGTTTATT
TTTGATGTGA AAGCACCGCT CACTCAAGCG CCCCACATTG ATGGCTATAC GGTGCGTTTG
GTTGATGAAT TAACCATAGA AGTGGATATA GATAAAGGGC AATCGTTAAA CGCATTGTTC
GCGCCACTCT CTCAGCAAGG TGTAGAGGTA GTGAGTATGC GCAATAAGGT GAATAGATTG
GAAGAGTTGT TTGTGTCGCT GGTTAATGGG CCAGCTAATA GCGAGGTGGC GAAATGA
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| Protein sequence | MTHSNAVNTA ALEIRGLKKI YDNKFEALKG VDLTVAEGDF FALLGPNGAG KSTTIGIICS
LVKKSGGSVK VFGVDIDKDF SKAKQFIGVV PQEFNFNMFE KVQDIVTNQA GYYGLPYKVA
VERAEKYLKK LGLWEKRSTP SRGLSGGMKR RLMIARALVH EPKLLILDEP TAGVDIELRR
SMWEFLQEIN AAGTTIILTT HYLEEAESLC RNVAIIDKGE LVENTSVKSL LKQLNKEVFI
FDVKAPLTQA PHIDGYTVRL VDELTIEVDI DKGQSLNALF APLSQQGVEV VSMRNKVNRL
EELFVSLVNG PANSEVAK
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