| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1165 |
|---|
| Symbol | |
|---|
| ID | 3968428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Saccharophagus degradans 2-40 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007912 |
|---|
| Strand | + |
|---|
| Start bp | 1501384 |
|---|
| End bp | 1501788 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637920236 |
|---|
| Product | protein-methionine-S-oxide reductase |
|---|
| Protein accession | YP_526639 |
|---|
| Protein GI | 90020812 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000102663 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGATC TCACAAAAAA AGACGATGAA TACTGGCGTG ATAAGCTCGA TGCAGAGCAA
TTTCGTATAT GCCGTGAAAA AGGTACAGAG CGACCCTTTA CCGGTGAGTA CTGTGATAGC
AAAGAGCCGG GCACATATCT GTGCCGCTGT TGTGCCGAGC CACTGTTTGA ATCTGCAACC
AAATACGACT CGGGGTCGGG TTGGCCGAGC TTCTTTCAGC CTATAAAAGG CGATGCGGTA
GGTGAGATTA AAGACACTAG CCACGGCATG GTTCGCGTCG AAGTGGTTTG CCACAATTGC
GGCTGCCATT TGGGGCACGT GTTTCCAGAT GGCCCTAAGC CCACAGGGTT AAGGTATTGC
ATCAACTCTG CCTCTATCCA ACTGCAAAAA GAGGGCGCGG AGTGA
|
|---|
| Protein sequence | MSDLTKKDDE YWRDKLDAEQ FRICREKGTE RPFTGEYCDS KEPGTYLCRC CAEPLFESAT
KYDSGSGWPS FFQPIKGDAV GEIKDTSHGM VRVEVVCHNC GCHLGHVFPD GPKPTGLRYC
INSASIQLQK EGAE
|
|---|
| |