Gene Sde_1155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1155 
Symbol 
ID3968399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1491242 
End bp1491490 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content45% 
IMG OID637920226 
Productregulatory protein, MarR 
Protein accessionYP_526629 
Protein GI90020802 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0425] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones64 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.102823 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCTA ATATAGATAT CAACGATGTT AAGCATCATT TGGATACCAA AGGTTTAACT 
TGCCCAGAGC CTGTTATGCT GCTGCACACC GCAGTGCGCG ATGCAGATGT TGGCGATGTG
ATACGCGTTG AAGCAACAGA CCCATCAACC CAGAGAGATA TCCCTAAGTT CTGTCAGTTT
CTAGGTCACC CTTTGTTGGC TAGCGCCCAC GAAGACGAAT TATATATTTA TTACATTCGC
AAAGGGTAA
 
Protein sequence
MTANIDINDV KHHLDTKGLT CPEPVMLLHT AVRDADVGDV IRVEATDPST QRDIPKFCQF 
LGHPLLASAH EDELYIYYIR KG