| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1148 |
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| Symbol | |
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| ID | 3968392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1485654 |
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| End bp | 1487345 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637920219 |
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| Product | general secretion pathway protein A |
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| Protein accession | YP_526622 |
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| Protein GI | 90020795 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.873243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCAAA CCTACTTTGG GCTAAAAGAA CACGCCTTTA CCATTGCCGT CGATCCTCGC
TACCTCTACA TGAGCCGCCA GCATCAGGAG GCGCTTGCAC ACTTGTTGTA CGGCGTTCAG
GGCGGTGGGT TTGTTTTACT TTCTGGCGAG GTGGGTACAG GTAAAACCAC AATCATTAAG
CGCCTACTAG AGCAGCTACC CGAAAACACA GACATAGCCA TTATTCTTAA CCCTATGTCT
AACGTGGTTG AGCTATTAAC AACTATTTGT GAGGAGTTTC AGCTTTCTTA CATAGGCGAC
GAACAAGGTG TTAAAACGCT AACCGACACC TTGCACCACT TTTTACTTAC AAACCACAGC
CAAGGTCGCA ATACTGTTTT GCTGGTGGAT GAAGCACAAC TTCTAGCCCC AGAAGTGCTC
GAACAATTGC GCCTGCTAAC TAACCTAGAA ACCAATGCCA AAAAACTGCT ACAAATAGTA
TTGGTGGGCC AACCAGAATT AAACACCCTG CTCTCGCAAC CGCGATTAAG GCAGCTTTCC
CAGCGAATTA CTGCGCGCTT TCACCTAAAG CCCCTATCGC TGGAAGAAAC CCACGCCTAT
ATTCATCACC GCTTAGATGT GGCAGGCATG CCCAGTGATC GCAACCCCTT TACCCCGCGA
GCAATAAAAC GCATTCATCA CTTTACCGGC GGTATCCCGC GCAGAATAAA TGTGTTGTGT
GAAAGGCTAT TGATAGGTGC CTATGGCCAC AACAAGCCCA AAATAGATAA CCAAATTTTA
AAACTTGCCG AAAGCGAAGT TATCGATAAC CTGGGCGAAC CCAAACCAAG CACGCCACCC
ACCACGTGGA TTATAGCGGC TGGCGTAGGC GCGGTGAGTG TAACCCTAAC TGCATTTTTT
ATGTGGCTGT ACGCAAGCAC TGGCAATCCT GCCCCTGTTG CACAAGTAGT GCAAGCCGCA
CCAGCCACTG CCACTGCGCC TACTATTGCA CCTATAACCA CATCGGTGCC GCAGCCAGAA
TCACAAACAT CAACGCCGAC TATTGCTGAA GCAAACAATA TTGTTATTAC TTCGCCCGCA
GCACAAACAG ACCATTTAAT TGCTAACGCG TTAAGCGCTC AAACACGCTT GCTTGAATAT
TTAAATATAG AAATAAGTAG CGATAATCAC CCCTGCTGGC AAGAAGACAG CCAAATACAA
TGCAATAAAG TAAAAATTGA TAGCTGGGAC GAGTTGCGAG AAATAAATCG CCCTGCCGTA
CTTACCCTCA CCACGCCGGA TAAATTTCGC GCCTATACCG TACTTATTGG GATTAACGCC
ACCGATGCGC GAGTACTTAG CGGGGAAAAC GACCAACAAA CAACCAAAGT TGTTGCCCTT
AGTGAACTGG GCCCGGCTTG GAGCGGAGAA ATCTTTTACC TTTGGCACCC CCCCAAAGGG
TTTACAGAAG CTTTAATTCA AGGGCAGCGC AGCCCTGCCA TTACATGGTT AGCGCAAAAG
TTTGCCGAGC TGGATGGCAG AGAGAAACCG CTAACGAACG ATCACTTTAG TGCGGCGCTG
GCAAAGCGAG TTAAAATATT TCAGCGCAAC AATGGCCTAA CCCCCGACGG GATAGTAGGC
GAACAAACCC TTTTAAAATT AAACGAAAAA CTGGGCATAG ATACCCCGTT ACAACCCGTT
TACGCTAATT AA
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| Protein sequence | MYQTYFGLKE HAFTIAVDPR YLYMSRQHQE ALAHLLYGVQ GGGFVLLSGE VGTGKTTIIK
RLLEQLPENT DIAIILNPMS NVVELLTTIC EEFQLSYIGD EQGVKTLTDT LHHFLLTNHS
QGRNTVLLVD EAQLLAPEVL EQLRLLTNLE TNAKKLLQIV LVGQPELNTL LSQPRLRQLS
QRITARFHLK PLSLEETHAY IHHRLDVAGM PSDRNPFTPR AIKRIHHFTG GIPRRINVLC
ERLLIGAYGH NKPKIDNQIL KLAESEVIDN LGEPKPSTPP TTWIIAAGVG AVSVTLTAFF
MWLYASTGNP APVAQVVQAA PATATAPTIA PITTSVPQPE SQTSTPTIAE ANNIVITSPA
AQTDHLIANA LSAQTRLLEY LNIEISSDNH PCWQEDSQIQ CNKVKIDSWD ELREINRPAV
LTLTTPDKFR AYTVLIGINA TDARVLSGEN DQQTTKVVAL SELGPAWSGE IFYLWHPPKG
FTEALIQGQR SPAITWLAQK FAELDGREKP LTNDHFSAAL AKRVKIFQRN NGLTPDGIVG
EQTLLKLNEK LGIDTPLQPV YAN
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