Gene Sde_1147 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSde_1147 
Symbol 
ID3968391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharophagus degradans 2-40 
KingdomBacteria 
Replicon accessionNC_007912 
Strand
Start bp1484823 
End bp1485638 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content44% 
IMG OID637920218 
Producthypothetical protein 
Protein accessionYP_526621 
Protein GI90020794 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTTAA TTTTAGATGC ACTAAAAAAA GCGGACGAAG ACCGCCCCGA AACTGCCAAC 
ACGGTAATGG TGCAGCCAGA GCTACCGGTT AGCTTTCCTC CACCAGAAAA AAATACACCA
CCGTATATAT GGGTTGGTGC TGTTGCTGGC TGCTTTGTGC TGGCAATAAT TTTATTTTTA
ATAATGGGTG GCGATAAACA AACGCCAACC ACCAATTACC AGCAACCGTC AAATACAATT
ACAGAACCTG CAACCTCCGT TATTGAACCA GCGAACCCCA TTCAACAGGC AACCAAACCC
GAGCCTGTAA TCGCGGTAGA CCCAACAGCA ATAGATGCGC TTTATGAAGA AAAGCCCGCT
TCTCTCAAAA AATCTGAAAT AGACTCGCTG TACGGCCAAG CAGAAAATGA AGTAAAAACT
GAAACCAAAA CTGTTGCCAC CAAAGCGCAA CCCGAGCAGG TAACAACTAA ACCCAAGGCA
GAAATAGCCA AAGAGTCGCA AGAGCCGGTT GCACAAACCA CTCAGGCCCC AAAAACCGCA
CAGGAATATT TAACACTTGC AGACTACCCA GGTGTTAAAA ATATTCGCGA CTTACCTGCG
AATATTCAAC TAAGCATACC TACACTTATG TACACCGATC ATATTTACGC AGAATCCGCA
TTAGATATTA TTATGCTAAA TAGAATGCCG TTGAGAAATA ACGACATCTC ACCCGAGGGT
GTAAGAGTGG AGCGCATTGT AGAGGACGGA GCCATTCTGG TTTACAAAGG CTATAGGTTT
AAAATATTTG CTCTAAATAG CTGGGTAAAT TTATAG
 
Protein sequence
MSLILDALKK ADEDRPETAN TVMVQPELPV SFPPPEKNTP PYIWVGAVAG CFVLAIILFL 
IMGGDKQTPT TNYQQPSNTI TEPATSVIEP ANPIQQATKP EPVIAVDPTA IDALYEEKPA
SLKKSEIDSL YGQAENEVKT ETKTVATKAQ PEQVTTKPKA EIAKESQEPV AQTTQAPKTA
QEYLTLADYP GVKNIRDLPA NIQLSIPTLM YTDHIYAESA LDIIMLNRMP LRNNDISPEG
VRVERIVEDG AILVYKGYRF KIFALNSWVN L