| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sde_1130 |
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| Symbol | |
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| ID | 3968317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharophagus degradans 2-40 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007912 |
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| Strand | - |
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| Start bp | 1466591 |
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| End bp | 1467124 |
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| Gene Length | 534 bp |
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| Protein Length | 177 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637920201 |
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| Product | putative tRNA/rRNA methyltransferase |
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| Protein accession | YP_526604 |
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| Protein GI | 90020777 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
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| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGTTA TTTGTCGCTT TTATCGAAGT GCTTTACAGG CGGCTAAACC GCAACAAAAC
AGGCTTAACA TGTTTAATAT TGTGCTTTTT GAACCAGAAA TACCGCCAAA TACCGGCAAT
ATCATCCGCG TGTGCGCTAA CACAGGTTGT CGGCTGCACC TGATAGAACC TTTAGGTTTT
GAATTGGATG ACAAGCGTTT ACGCAGGGCG GGGCTAGATT ATGGCGAATG GCAGAGTGTG
GTAACGCATG CTAATTGGGA TGCCTTTATC AAGCAGCAGG CCCCAGAGCG CTTGTGGGCG
CTATCTACTA AGGGCACTAA ATTTCACCAT GAGGTAAGTA TTGGCGAGGG AGATTACCTT
GTATTTGGGC CAGAAACCCG TGGGCTACCC ATGGAGATTC TCGAATACAT CACTTTCGAT
AACGTATTAC GCATACCCAT GCTACCTAAT AGTCGCAGTA TGAACCTTTC TAATGCCGCA
TCGGTTATGG TTTATGAGGC GTGGCGGCAA TTGGGATTTG CAGGTAGTAA ATAG
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| Protein sequence | MTVICRFYRS ALQAAKPQQN RLNMFNIVLF EPEIPPNTGN IIRVCANTGC RLHLIEPLGF
ELDDKRLRRA GLDYGEWQSV VTHANWDAFI KQQAPERLWA LSTKGTKFHH EVSIGEGDYL
VFGPETRGLP MEILEYITFD NVLRIPMLPN SRSMNLSNAA SVMVYEAWRQ LGFAGSK
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